Protein–RNA interactions for Protein: A2ACP1

Ttc39a, Tetratricopeptide repeat protein 39A, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39aA2ACP1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc39aA2ACP1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc39aA2ACP1 Phf7-203ENSMUST00000226565 1971 ntBASIC16.27■□□□□ 0.2
Ttc39aA2ACP1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc39aA2ACP1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc39aA2ACP1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc39aA2ACP1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc39aA2ACP1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc39aA2ACP1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc39aA2ACP1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.27■□□□□ 0.2
Ttc39aA2ACP1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ttc39aA2ACP1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc39aA2ACP1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc39aA2ACP1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc39aA2ACP1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.27■□□□□ 0.2
Ttc39aA2ACP1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.27■□□□□ 0.2
Ttc39aA2ACP1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc39aA2ACP1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc39aA2ACP1 Gm28659-201ENSMUST00000188013 759 ntBASIC16.27■□□□□ 0.2
Ttc39aA2ACP1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc39aA2ACP1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ttc39aA2ACP1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Ttc39aA2ACP1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ttc39aA2ACP1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Ttc39aA2ACP1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ttc39aA2ACP1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ttc39aA2ACP1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ttc39aA2ACP1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.27■□□□□ 0.19
Ttc39aA2ACP1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ttc39aA2ACP1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ttc39aA2ACP1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ttc39aA2ACP1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc39aA2ACP1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc39aA2ACP1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Ttc39aA2ACP1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc39aA2ACP1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.26■□□□□ 0.19
Ttc39aA2ACP1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.26■□□□□ 0.19
Ttc39aA2ACP1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.26■□□□□ 0.19
Ttc39aA2ACP1 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.26■□□□□ 0.19
Ttc39aA2ACP1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc39aA2ACP1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc39aA2ACP1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc39aA2ACP1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc39aA2ACP1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc39aA2ACP1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ttc39aA2ACP1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc39aA2ACP1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc39aA2ACP1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ttc39aA2ACP1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ttc39aA2ACP1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ttc39aA2ACP1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ttc39aA2ACP1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ttc39aA2ACP1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ttc39aA2ACP1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ttc39aA2ACP1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ttc39aA2ACP1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ttc39aA2ACP1 Gm15372-201ENSMUST00000120729 834 ntBASIC16.25■□□□□ 0.19
Ttc39aA2ACP1 Gm12895-201ENSMUST00000122214 226 ntBASIC16.25■□□□□ 0.19
Ttc39aA2ACP1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ttc39aA2ACP1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.25■□□□□ 0.19
Ttc39aA2ACP1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ttc39aA2ACP1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.25■□□□□ 0.19
Ttc39aA2ACP1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ttc39aA2ACP1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ttc39aA2ACP1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ttc39aA2ACP1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
Ttc39aA2ACP1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ttc39aA2ACP1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ttc39aA2ACP1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ttc39aA2ACP1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ttc39aA2ACP1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.24■□□□□ 0.19
Ttc39aA2ACP1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ttc39aA2ACP1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ttc39aA2ACP1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ttc39aA2ACP1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ttc39aA2ACP1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ttc39aA2ACP1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
Ttc39aA2ACP1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.24■□□□□ 0.19
Ttc39aA2ACP1 Gm44450-201ENSMUST00000199528 114 ntBASIC16.24■□□□□ 0.19
Ttc39aA2ACP1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms