Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Gm6623-201ENSMUST00000173570 544 ntBASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Gm17808-201ENSMUST00000200859 894 ntBASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Gm18421-201ENSMUST00000204122 625 ntBASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Gm11950-201ENSMUST00000121615 838 ntBASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Gm33142-201ENSMUST00000193913 867 ntBASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Gm29707-201ENSMUST00000196325 491 ntBASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.61■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.61■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.59■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms