Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Gm5867-201ENSMUST00000063197 592 ntBASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm3854A0A1B0GSS6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm3854A0A1B0GSS6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Gm3854A0A1B0GSS6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Gm3854A0A1B0GSS6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Gm3854A0A1B0GSS6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm3854A0A1B0GSS6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm3854A0A1B0GSS6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm3854A0A1B0GSS6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Gm3854A0A1B0GSS6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gm3854A0A1B0GSS6 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.66■□□□□ 0.26
Gm3854A0A1B0GSS6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Gm3854A0A1B0GSS6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm3854A0A1B0GSS6 Rps4l-201ENSMUST00000071745 943 ntBASIC16.66■□□□□ 0.26
Gm3854A0A1B0GSS6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Gm3854A0A1B0GSS6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Gm3854A0A1B0GSS6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm3854A0A1B0GSS6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gm3854A0A1B0GSS6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm3854A0A1B0GSS6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm3854A0A1B0GSS6 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm3854A0A1B0GSS6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm3854A0A1B0GSS6 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm3854A0A1B0GSS6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.64■□□□□ 0.25
Gm3854A0A1B0GSS6 Gm15165-201ENSMUST00000118140 502 ntBASIC16.64■□□□□ 0.25
Gm3854A0A1B0GSS6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm3854A0A1B0GSS6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.64■□□□□ 0.25
Gm3854A0A1B0GSS6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.64■□□□□ 0.25
Gm3854A0A1B0GSS6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm3854A0A1B0GSS6 Gm6376-201ENSMUST00000209407 580 ntBASIC16.64■□□□□ 0.25
Gm3854A0A1B0GSS6 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.64■□□□□ 0.25
Gm3854A0A1B0GSS6 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm3854A0A1B0GSS6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Gm3854A0A1B0GSS6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm3854A0A1B0GSS6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.64■□□□□ 0.25
Gm3854A0A1B0GSS6 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.64■□□□□ 0.25
Gm3854A0A1B0GSS6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm3854A0A1B0GSS6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 Gm44454-201ENSMUST00000198541 138 ntBASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 Gm44430-201ENSMUST00000203376 995 ntBASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Gm3854A0A1B0GSS6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.62■□□□□ 0.25
Gm3854A0A1B0GSS6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm3854A0A1B0GSS6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm3854A0A1B0GSS6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms