Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.1■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.1■□□□□ 0.33
Rpl9-ps6A0A140T8T4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rpl9-ps6A0A140T8T4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rpl9-ps6A0A140T8T4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.09■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.09■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.09■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rpl9-ps6A0A140T8T4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl9-ps6A0A140T8T4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Ank2-226ENSMUST00000189368 339 ntBASIC17.07■□□□□ 0.32
Rpl9-ps6A0A140T8T4 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.07■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Gm15794-201ENSMUST00000120182 631 ntBASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.06■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.05■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl9-ps6A0A140T8T4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.05■□□□□ 0.32
Rpl9-ps6A0A140T8T4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.05■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.05■□□□□ 0.32
Rpl9-ps6A0A140T8T4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms