Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Gm10849-201ENSMUST00000100397 618 ntBASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm18284-201ENSMUST00000172604 624 ntBASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igkv1-88A0A140T8N1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm19721-201ENSMUST00000195284 1764 ntBASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm26524-201ENSMUST00000192339 390 ntBASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm4968-201ENSMUST00000071458 858 ntBASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm11841-201ENSMUST00000117060 1963 ntBASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Igkv1-88A0A140T8N1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms