Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-4A0A0G2JG01 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Mir2861-201ENSMUST00000175539 82 ntBASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-4A0A0G2JG01 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm10418-201ENSMUST00000100943 576 ntBASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm10013-201ENSMUST00000106074 672 ntBASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-4A0A0G2JG01 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm23634-201ENSMUST00000175071 91 ntBASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms