Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.52□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13d-4A0A0G2JFX3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Dio3-201ENSMUST00000097228 1449 ntBASIC11.52□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-4A0A0G2JFX3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm11249-201ENSMUST00000117071 859 ntBASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm42545-201ENSMUST00000202755 922 ntBASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm21596-201ENSMUST00000178049 1316 ntBASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms