Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm7370-201ENSMUST00000219471 767 ntBASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm7213-201ENSMUST00000215977 950 ntBASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv30A0A0B4J1P1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trbv30A0A0B4J1P1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms