Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Gm4974-201ENSMUST00000209974 875 ntBASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav19A0A0B4J1K4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav19A0A0B4J1K4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Gm18284-201ENSMUST00000172604 624 ntBASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav19A0A0B4J1K4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav19A0A0B4J1K4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav19A0A0B4J1K4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav19A0A0B4J1K4 Dio3-201ENSMUST00000097228 1449 ntBASIC12.47□□□□□ -0.41
Trav19A0A0B4J1K4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav19A0A0B4J1K4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav19A0A0B4J1K4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav19A0A0B4J1K4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Trav19A0A0B4J1K4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav19A0A0B4J1K4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav19A0A0B4J1K4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav19A0A0B4J1K4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav19A0A0B4J1K4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav19A0A0B4J1K4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav19A0A0B4J1K4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav19A0A0B4J1K4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms