Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-4A0A0B4J1K2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav9-4A0A0B4J1K2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9-4A0A0B4J1K2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9-4A0A0B4J1K2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Trav9-4A0A0B4J1K2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9-4A0A0B4J1K2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9-4A0A0B4J1K2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9-4A0A0B4J1K2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav9-4A0A0B4J1K2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9-4A0A0B4J1K2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Trav9-4A0A0B4J1K2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-4A0A0B4J1K2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm10566-201ENSMUST00000086739 996 ntBASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9-4A0A0B4J1K2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms