Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-42A0A0A6YY38 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-42A0A0A6YY38 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.39■□□□□ 0.05
Ighv1-42A0A0A6YY38 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-42A0A0A6YY38 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-42A0A0A6YY38 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-42A0A0A6YY38 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-42A0A0A6YY38 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-42A0A0A6YY38 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-42A0A0A6YY38 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-42A0A0A6YY38 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 Gm28659-201ENSMUST00000188013 759 ntBASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-42A0A0A6YY38 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-42A0A0A6YY38 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.37■□□□□ 0.05
Ighv1-42A0A0A6YY38 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ighv1-42A0A0A6YY38 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-42A0A0A6YY38 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-42A0A0A6YY38 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ighv1-42A0A0A6YY38 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-42A0A0A6YY38 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-42A0A0A6YY38 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.37■□□□□ 0.05
Ighv1-42A0A0A6YY38 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.37■□□□□ 0.05
Ighv1-42A0A0A6YY38 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-42A0A0A6YY38 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-42A0A0A6YY38 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-42A0A0A6YY38 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-42A0A0A6YY38 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-42A0A0A6YY38 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-42A0A0A6YY38 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-42A0A0A6YY38 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.37■□□□□ 0.05
Ighv1-42A0A0A6YY38 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-42A0A0A6YY38 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-42A0A0A6YY38 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-42A0A0A6YY38 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.35■□□□□ 0.05
Ighv1-42A0A0A6YY38 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-42A0A0A6YY38 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.35■□□□□ 0.05
Ighv1-42A0A0A6YY38 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-42A0A0A6YY38 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ighv1-42A0A0A6YY38 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-42A0A0A6YY38 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-42A0A0A6YY38 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-42A0A0A6YY38 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ighv1-42A0A0A6YY38 Mir8098-201ENSMUST00000184011 137 ntBASIC15.35■□□□□ 0.05
Ighv1-42A0A0A6YY38 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.35■□□□□ 0.05
Ighv1-42A0A0A6YY38 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-42A0A0A6YY38 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-42A0A0A6YY38 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-42A0A0A6YY38 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-42A0A0A6YY38 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms