Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Gm12527-201ENSMUST00000117967 564 ntBASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv23A0A0A6YWQ1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Gm11249-201ENSMUST00000117071 859 ntBASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Gm27275-201ENSMUST00000184318 272 ntBASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv23A0A0A6YWQ1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Gm37856-201ENSMUST00000191634 999 ntBASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Trmt13-210ENSMUST00000198454 880 ntBASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trbv23A0A0A6YWQ1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trbv23A0A0A6YWQ1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms