Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Gm9731-201ENSMUST00000209480 747 ntBASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav21-dv12A0A075B6C4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gm8520-201ENSMUST00000186517 868 ntBASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav21-dv12A0A075B6C4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Haglr-201ENSMUST00000100000 2085 ntBASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gm13216-201ENSMUST00000117145 591 ntBASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gm7638-201ENSMUST00000121348 967 ntBASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gm38027-201ENSMUST00000192315 235 ntBASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav21-dv12A0A075B6C4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms