Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Mir7071-201ENSMUST00000184847 69 ntBASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-4A0A075B6B4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6-4A0A075B6B4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6-4A0A075B6B4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6-4A0A075B6B4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6-4A0A075B6B4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-4A0A075B6B4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Mir1668-201ENSMUST00000184114 107 ntBASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms