Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Gm18666-201ENSMUST00000190039 958 ntBASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Trav6n-6A0A075B6B2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6n-6A0A075B6B2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6n-6A0A075B6B2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6n-6A0A075B6B2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6n-6A0A075B6B2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6n-6A0A075B6B2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav6n-6A0A075B6B2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav6n-6A0A075B6B2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6n-6A0A075B6B2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6n-6A0A075B6B2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6n-6A0A075B6B2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6n-6A0A075B6B2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.46□□□□□ -0.42
Trav6n-6A0A075B6B2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Trav6n-6A0A075B6B2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6n-6A0A075B6B2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6n-6A0A075B6B2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6n-6A0A075B6B2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6n-6A0A075B6B2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Gm11927-201ENSMUST00000118472 759 ntBASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Gm13158-201ENSMUST00000122007 736 ntBASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms