Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Trav18A0A075B656 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.68□□□□□ -0.22
Trav18A0A075B656 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav18A0A075B656 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav18A0A075B656 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav18A0A075B656 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav18A0A075B656 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav18A0A075B656 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav18A0A075B656 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav18A0A075B656 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav18A0A075B656 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav18A0A075B656 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav18A0A075B656 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav18A0A075B656 Gm7638-201ENSMUST00000121348 967 ntBASIC13.67□□□□□ -0.22
Trav18A0A075B656 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav18A0A075B656 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav18A0A075B656 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav18A0A075B656 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav18A0A075B656 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav18A0A075B656 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav18A0A075B656 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav18A0A075B656 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav18A0A075B656 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav18A0A075B656 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav18A0A075B656 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav18A0A075B656 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav18A0A075B656 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Trav18A0A075B656 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Gm10653-202ENSMUST00000139570 835 ntBASIC13.66□□□□□ -0.22
Trav18A0A075B656 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Gm29257-201ENSMUST00000186115 639 ntBASIC13.66□□□□□ -0.22
Trav18A0A075B656 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.66□□□□□ -0.22
Trav18A0A075B656 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trav18A0A075B656 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav18A0A075B656 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms