Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Gm22238-201ENSMUST00000175222 88 ntBASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Gm7160-202ENSMUST00000188519 1027 ntBASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Gm42501-201ENSMUST00000200220 1026 ntBASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Gm5576-201ENSMUST00000075809 1236 ntBASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-4A0A075B654 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3-4A0A075B654 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC11.27□□□□□ -0.6
Trav3-4A0A075B654 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3-4A0A075B654 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Trav3-4A0A075B654 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3-4A0A075B654 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3-4A0A075B654 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3-4A0A075B654 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3-4A0A075B654 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3-4A0A075B654 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3-4A0A075B654 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav3-4A0A075B654 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-4A0A075B654 Gm11841-201ENSMUST00000117060 1963 ntBASIC11.27□□□□□ -0.61
Trav3-4A0A075B654 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav3-4A0A075B654 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav3-4A0A075B654 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-4A0A075B654 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-4A0A075B654 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-4A0A075B654 Spcs1-204ENSMUST00000226782 949 ntBASIC11.27□□□□□ -0.61
Trav3-4A0A075B654 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-4A0A075B654 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-4A0A075B654 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-4A0A075B654 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.27□□□□□ -0.61
Trav3-4A0A075B654 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-4A0A075B654 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-4A0A075B654 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-4A0A075B654 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-4A0A075B654 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-4A0A075B654 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-4A0A075B654 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms