Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav12-3A0A075B648 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-3A0A075B648 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-3A0A075B648 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-3A0A075B648 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-3A0A075B648 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-3A0A075B648 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-3A0A075B648 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav12-3A0A075B648 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Trav12-3A0A075B648 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-3A0A075B648 Gm38205-201ENSMUST00000192243 258 ntBASIC12.21□□□□□ -0.45
Trav12-3A0A075B648 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-3A0A075B648 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-3A0A075B648 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Trav12-3A0A075B648 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav12-3A0A075B648 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav12-3A0A075B648 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Trav12-3A0A075B648 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav12-3A0A075B648 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav12-3A0A075B648 AC165080.2-201ENSMUST00000217491 1530 ntBASIC12.21□□□□□ -0.46
Trav12-3A0A075B648 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Trav12-3A0A075B648 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav12-3A0A075B648 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-3A0A075B648 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-3A0A075B648 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Spcs1-204ENSMUST00000226782 949 ntBASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms