Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Gm15565-201ENSMUST00000118890 427 ntBASIC14.81□□□□□ -0.04
Trav10A0A075B642 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.81□□□□□ -0.04
Trav10A0A075B642 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav10A0A075B642 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav10A0A075B642 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav10A0A075B642 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav10A0A075B642 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav10A0A075B642 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav10A0A075B642 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav10A0A075B642 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav10A0A075B642 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav10A0A075B642 Gm13559-201ENSMUST00000120476 863 ntBASIC14.8□□□□□ -0.04
Trav10A0A075B642 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav10A0A075B642 Gm2274-201ENSMUST00000184539 609 ntBASIC14.8□□□□□ -0.04
Trav10A0A075B642 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.8□□□□□ -0.04
Trav10A0A075B642 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav10A0A075B642 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav10A0A075B642 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.8□□□□□ -0.04
Trav10A0A075B642 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav10A0A075B642 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav10A0A075B642 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav10A0A075B642 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav10A0A075B642 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav10A0A075B642 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav10A0A075B642 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav10A0A075B642 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav10A0A075B642 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav10A0A075B642 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav10A0A075B642 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav10A0A075B642 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav10A0A075B642 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
Trav10A0A075B642 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav10A0A075B642 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav10A0A075B642 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav10A0A075B642 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav10A0A075B642 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav10A0A075B642 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav10A0A075B642 Gm43799-201ENSMUST00000201845 579 ntBASIC14.79□□□□□ -0.04
Trav10A0A075B642 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav10A0A075B642 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav10A0A075B642 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.79□□□□□ -0.04
Trav10A0A075B642 Gm7370-201ENSMUST00000219471 767 ntBASIC14.79□□□□□ -0.04
Trav10A0A075B642 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav10A0A075B642 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav10A0A075B642 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav10A0A075B642 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav10A0A075B642 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav10A0A075B642 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav10A0A075B642 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.79□□□□□ -0.04
Trav10A0A075B642 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav10A0A075B642 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav10A0A075B642 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.78□□□□□ -0.04
Trav10A0A075B642 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav10A0A075B642 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav10A0A075B642 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav10A0A075B642 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav10A0A075B642 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.78□□□□□ -0.04
Trav10A0A075B642 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav10A0A075B642 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.78□□□□□ -0.04
Trav10A0A075B642 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.78□□□□□ -0.04
Trav10A0A075B642 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav10A0A075B642 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav10A0A075B642 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav10A0A075B642 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms