Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Gm10138-203ENSMUST00000206952 366 ntBASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Gm6365-201ENSMUST00000054711 744 ntBASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-2A0A075B638 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Gm6211-202ENSMUST00000167849 925 ntBASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Gm5408-201ENSMUST00000197998 747 ntBASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-2A0A075B638 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-2A0A075B638 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-2A0A075B638 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-2A0A075B638 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms