Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7n-4A0A075B620 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Nespas-201ENSMUST00000143738 1083 ntBASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Mir2861-201ENSMUST00000175539 82 ntBASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Gm6420-201ENSMUST00000193885 723 ntBASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7n-4A0A075B620 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav7n-4A0A075B620 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7n-4A0A075B620 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7n-4A0A075B620 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7n-4A0A075B620 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7n-4A0A075B620 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7n-4A0A075B620 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7n-4A0A075B620 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
Trav7n-4A0A075B620 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.66□□□□□ -0.38
Trav7n-4A0A075B620 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav7n-4A0A075B620 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7n-4A0A075B620 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Trav7n-4A0A075B620 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav7n-4A0A075B620 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms