Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav9-1A0A075B601 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-1A0A075B601 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9-1A0A075B601 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9-1A0A075B601 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9-1A0A075B601 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9-1A0A075B601 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.02□□□□□ -0.32
Trav9-1A0A075B601 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav9-1A0A075B601 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms