Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN11AQ9UI33 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN11AQ9UI33 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SCN11AQ9UI33 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN11AQ9UI33 AC068870.3-201ENST00000625077 2536 ntBASIC5.65□□□□□ -1.5
SCN11AQ9UI33 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SCN11AQ9UI33 MIR372-201ENST00000362225 67 ntBASIC5.65□□□□□ -1.5
SCN11AQ9UI33 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.65□□□□□ -1.5
SCN11AQ9UI33 CDY14P-201ENST00000431260 1014 ntBASIC5.65□□□□□ -1.5
SCN11AQ9UI33 CDY12P-201ENST00000440679 1015 ntBASIC5.65□□□□□ -1.5
SCN11AQ9UI33 CDY13P-201ENST00000445813 1015 ntBASIC5.65□□□□□ -1.5
SCN11AQ9UI33 CDY23P-201ENST00000451661 1014 ntBASIC5.65□□□□□ -1.5
SCN11AQ9UI33 AC010374.1-201ENST00000503762 1237 ntBASIC5.65□□□□□ -1.5
SCN11AQ9UI33 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.65□□□□□ -1.5
SCN11AQ9UI33 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.65□□□□□ -1.5
SCN11AQ9UI33 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.65□□□□□ -1.5
SCN11AQ9UI33 AC079587.1-201ENST00000603846 277 ntBASIC5.65□□□□□ -1.5
SCN11AQ9UI33 Z98200.1-201ENST00000607298 470 ntBASIC5.65□□□□□ -1.5
SCN11AQ9UI33 AC007546.2-201ENST00000623996 360 ntBASIC5.65□□□□□ -1.5
SCN11AQ9UI33 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCN11AQ9UI33 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.65□□□□□ -1.5
SCN11AQ9UI33 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCN11AQ9UI33 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCN11AQ9UI33 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCN11AQ9UI33 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SCN11AQ9UI33 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SCN11AQ9UI33 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
SCN11AQ9UI33 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SCN11AQ9UI33 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SCN11AQ9UI33 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.65□□□□□ -1.51
SCN11AQ9UI33 SNORD46.1-201ENST00000364139 104 ntBASIC5.65□□□□□ -1.51
SCN11AQ9UI33 MIR921-201ENST00000401133 56 ntBASIC5.65□□□□□ -1.51
SCN11AQ9UI33 AL035696.2-201ENST00000407941 709 ntBASIC5.65□□□□□ -1.51
SCN11AQ9UI33 RNA5SP36-201ENST00000410197 133 ntBASIC5.65□□□□□ -1.51
SCN11AQ9UI33 CEACAMP8-201ENST00000413902 580 ntBASIC5.65□□□□□ -1.51
SCN11AQ9UI33 GTF3AP5-201ENST00000442645 697 ntBASIC5.65□□□□□ -1.51
SCN11AQ9UI33 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.65□□□□□ -1.51
SCN11AQ9UI33 AL132838.2-201ENST00000492041 314 ntBASIC5.65□□□□□ -1.51
SCN11AQ9UI33 RN7SL812P-201ENST00000493791 279 ntBASIC5.65□□□□□ -1.51
SCN11AQ9UI33 RNA5SP519-201ENST00000516480 119 ntBASIC5.65□□□□□ -1.51
SCN11AQ9UI33 FAM27D1-201ENST00000612308 341 ntBASIC5.65□□□□□ -1.51
SCN11AQ9UI33 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.51
SCN11AQ9UI33 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.65□□□□□ -1.51
SCN11AQ9UI33 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SCN11AQ9UI33 AP000432.2-201ENST00000624164 2048 ntBASIC5.64□□□□□ -1.51
SCN11AQ9UI33 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SCN11AQ9UI33 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SCN11AQ9UI33 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCN11AQ9UI33 NXPH1-205ENST00000602349 1953 ntBASIC5.64□□□□□ -1.51
SCN11AQ9UI33 RNA5SP283-201ENST00000365604 119 ntBASIC5.64□□□□□ -1.51
SCN11AQ9UI33 CYCSP19-201ENST00000411715 316 ntBASIC5.64□□□□□ -1.51
SCN11AQ9UI33 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.64□□□□□ -1.51
SCN11AQ9UI33 COX6B1P7-201ENST00000430845 235 ntBASIC5.64□□□□□ -1.51
SCN11AQ9UI33 RPL23AP83-201ENST00000434984 473 ntBASIC5.64□□□□□ -1.51
SCN11AQ9UI33 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.64□□□□□ -1.51
SCN11AQ9UI33 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SCN11AQ9UI33 AC104164.2-201ENST00000496953 495 ntBASIC5.64□□□□□ -1.51
SCN11AQ9UI33 HMGB3P16-201ENST00000508037 287 ntBASIC5.64□□□□□ -1.51
SCN11AQ9UI33 RPL23AP97-201ENST00000568955 471 ntBASIC5.64□□□□□ -1.51
SCN11AQ9UI33 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.64□□□□□ -1.51
SCN11AQ9UI33 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCN11AQ9UI33 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SCN11AQ9UI33 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCN11AQ9UI33 CYP1D1P-201ENST00000416662 1433 ntBASIC5.64□□□□□ -1.51
SCN11AQ9UI33 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SCN11AQ9UI33 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.63□□□□□ -1.51
SCN11AQ9UI33 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCN11AQ9UI33 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SCN11AQ9UI33 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCN11AQ9UI33 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.63□□□□□ -1.51
SCN11AQ9UI33 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCN11AQ9UI33 RNU1-83P-201ENST00000363426 164 ntBASIC5.63□□□□□ -1.51
SCN11AQ9UI33 CTSL3P-202ENST00000412179 788 ntBASIC5.63□□□□□ -1.51
SCN11AQ9UI33 RPL6P29-201ENST00000414863 865 ntBASIC5.63□□□□□ -1.51
SCN11AQ9UI33 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN11AQ9UI33 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN11AQ9UI33 AC108751.2-201ENST00000469993 231 ntBASIC5.63□□□□□ -1.51
SCN11AQ9UI33 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.63□□□□□ -1.51
SCN11AQ9UI33 AC022916.3-201ENST00000592961 742 ntBASIC5.63□□□□□ -1.51
SCN11AQ9UI33 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN11AQ9UI33 AL133243.3-201ENST00000617415 3004 ntBASIC5.63□□□□□ -1.51
SCN11AQ9UI33 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN11AQ9UI33 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCN11AQ9UI33 AL161912.2-201ENST00000565707 3007 ntBASIC5.63□□□□□ -1.51
SCN11AQ9UI33 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN11AQ9UI33 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 AL592291.1-201ENST00000403830 352 ntBASIC5.62□□□□□ -1.51
SCN11AQ9UI33 AL080315.1-201ENST00000406055 466 ntBASIC5.62□□□□□ -1.51
SCN11AQ9UI33 RAB9AP4-201ENST00000415230 609 ntBASIC5.62□□□□□ -1.51
SCN11AQ9UI33 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 OR2AH1P-201ENST00000425717 928 ntBASIC5.62□□□□□ -1.51
SCN11AQ9UI33 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 RPL23AP37-201ENST00000479658 549 ntBASIC5.62□□□□□ -1.51
SCN11AQ9UI33 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 AC108064.1-201ENST00000513791 460 ntBASIC5.62□□□□□ -1.51
SCN11AQ9UI33 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 AC023043.4-201ENST00000612081 449 ntBASIC5.62□□□□□ -1.51
SCN11AQ9UI33 MIR7151-201ENST00000617477 60 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms