Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 RNU6-666P-201ENST00000363499 107 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 RNU6-452P-201ENST00000384406 107 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 MIR320B1-201ENST00000390209 79 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 VDAC2P1-201ENST00000399358 958 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 AC079809.1-201ENST00000415468 276 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 AL121878.1-201ENST00000418638 859 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 AC092634.2-201ENST00000428146 1010 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 CETN4P-201ENST00000432407 469 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 SEPT14P24-201ENST00000447236 180 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 OR2AO1P-201ENST00000476497 403 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 METTL15P1-201ENST00000481421 1045 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 MTCO3P35-201ENST00000485582 781 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 RPL7L1P4-201ENST00000513004 707 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 RNU6-941P-201ENST00000516346 108 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 MTND2P38-201ENST00000522536 667 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 OR5AK3P-201ENST00000527486 1297 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 AC125612.1-201ENST00000547580 377 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 AC009852.2-201ENST00000567898 485 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 DPRXP4-201ENST00000578053 568 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 OR2BH1P-201ENST00000608850 864 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 AP000484.1-201ENST00000620067 1252 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC023421.1-201ENST00000590535 1785 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 RN7SKP160-201ENST00000363804 340 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 SNORA67-201ENST00000384423 137 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 RNU6-225P-201ENST00000384613 103 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 TAS2R15P-201ENST00000390674 928 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 RPS27AP11-201ENST00000402798 447 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC105402.1-201ENST00000413336 545 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 RPL7L1P9-201ENST00000431298 745 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AL161722.2-201ENST00000434731 981 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 VN1R25P-201ENST00000443385 738 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC243772.1-201ENST00000451620 410 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 RPS4XP12-201ENST00000461747 709 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 RN7SL189P-201ENST00000468631 289 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 RPL21P131-201ENST00000497298 483 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 MTND4LP2-201ENST00000502312 285 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC112673.1-201ENST00000513168 575 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC108471.1-201ENST00000513977 287 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC126177.5-201ENST00000549599 178 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC087897.1-201ENST00000550134 156 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 FAM72A-208ENST00000607379 1139 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC096586.1-201ENST00000610267 561 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC109309.2-201ENST00000612597 332 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AL121890.3-201ENST00000618494 516 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AC136428.4-201ENST00000634254 1155 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 CYP4F35P-202ENST00000636121 390 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms