Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MTCO2P1-201ENST00000424648 477 ntBASIC4.83□□□□□ -1.64
PDX1P52945 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.83□□□□□ -1.64
PDX1P52945 AL512661.1-201ENST00000434586 1253 ntBASIC4.83□□□□□ -1.64
PDX1P52945 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.83□□□□□ -1.64
PDX1P52945 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.83□□□□□ -1.64
PDX1P52945 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.83□□□□□ -1.64
PDX1P52945 BX842559.2-201ENST00000451418 605 ntBASIC4.83□□□□□ -1.64
PDX1P52945 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.83□□□□□ -1.64
PDX1P52945 EIF2S2P5-201ENST00000457635 968 ntBASIC4.83□□□□□ -1.64
PDX1P52945 AC092905.1-201ENST00000467527 949 ntBASIC4.83□□□□□ -1.64
PDX1P52945 RN7SL354P-201ENST00000469282 294 ntBASIC4.83□□□□□ -1.64
PDX1P52945 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
PDX1P52945 SUMO1P1-201ENST00000497904 306 ntBASIC4.83□□□□□ -1.64
PDX1P52945 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.83□□□□□ -1.64
PDX1P52945 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.83□□□□□ -1.64
PDX1P52945 IGKV1-32-201ENST00000519290 311 ntBASIC4.83□□□□□ -1.64
PDX1P52945 AC020937.1-201ENST00000519677 1013 ntBASIC4.83□□□□□ -1.64
PDX1P52945 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.83□□□□□ -1.64
PDX1P52945 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.83□□□□□ -1.64
PDX1P52945 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.83□□□□□ -1.64
PDX1P52945 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.83□□□□□ -1.64
PDX1P52945 OSBPL9P3-201ENST00000534523 595 ntBASIC4.83□□□□□ -1.64
PDX1P52945 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.83□□□□□ -1.64
PDX1P52945 AC006518.1-201ENST00000541449 943 ntBASIC4.83□□□□□ -1.64
PDX1P52945 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDX1P52945 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.83□□□□□ -1.64
PDX1P52945 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDX1P52945 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.83□□□□□ -1.64
PDX1P52945 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.83□□□□□ -1.64
PDX1P52945 EIF1P5-201ENST00000585002 234 ntBASIC4.83□□□□□ -1.64
PDX1P52945 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.83□□□□□ -1.64
PDX1P52945 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PDX1P52945 BNIP3P35-201ENST00000604530 490 ntBASIC4.83□□□□□ -1.64
PDX1P52945 AC144521.1-201ENST00000607148 956 ntBASIC4.83□□□□□ -1.64
PDX1P52945 AC024933.1-201ENST00000608472 348 ntBASIC4.83□□□□□ -1.64
PDX1P52945 AC019131.2-201ENST00000609071 870 ntBASIC4.83□□□□□ -1.64
PDX1P52945 AC090617.9-201ENST00000623751 147 ntBASIC4.83□□□□□ -1.64
PDX1P52945 FRG1DP-201ENST00000635586 771 ntBASIC4.83□□□□□ -1.64
PDX1P52945 AC073869.7-201ENST00000640874 297 ntBASIC4.83□□□□□ -1.64
PDX1P52945 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDX1P52945 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PDX1P52945 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
PDX1P52945 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDX1P52945 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDX1P52945 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
PDX1P52945 SAMMSON-226ENST00000642089 1582 ntBASIC4.82□□□□□ -1.64
PDX1P52945 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDX1P52945 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PDX1P52945 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDX1P52945 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDX1P52945 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDX1P52945 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDX1P52945 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDX1P52945 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
PDX1P52945 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDX1P52945 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.82□□□□□ -1.64
PDX1P52945 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDX1P52945 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDX1P52945 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDX1P52945 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.82□□□□□ -1.64
PDX1P52945 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.82□□□□□ -1.64
PDX1P52945 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.82□□□□□ -1.64
PDX1P52945 C4BPAP2-201ENST00000428434 478 ntBASIC4.82□□□□□ -1.64
PDX1P52945 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.82□□□□□ -1.64
PDX1P52945 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
PDX1P52945 AL157827.1-201ENST00000447622 132 ntBASIC4.82□□□□□ -1.64
PDX1P52945 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.82□□□□□ -1.64
PDX1P52945 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.82□□□□□ -1.64
PDX1P52945 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
PDX1P52945 AL672167.3-201ENST00000465951 960 ntBASIC4.82□□□□□ -1.64
PDX1P52945 AC006967.1-201ENST00000467608 589 ntBASIC4.82□□□□□ -1.64
PDX1P52945 AC091544.1-201ENST00000484702 348 ntBASIC4.82□□□□□ -1.64
PDX1P52945 MTCO2P9-201ENST00000503214 694 ntBASIC4.82□□□□□ -1.64
PDX1P52945 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDX1P52945 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.82□□□□□ -1.64
PDX1P52945 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.82□□□□□ -1.64
PDX1P52945 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.82□□□□□ -1.64
PDX1P52945 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PDX1P52945 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.82□□□□□ -1.64
PDX1P52945 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.82□□□□□ -1.64
PDX1P52945 SNORD39.2-201ENST00000579995 76 ntBASIC4.82□□□□□ -1.64
PDX1P52945 AC127024.5-201ENST00000580085 462 ntBASIC4.82□□□□□ -1.64
PDX1P52945 MIR5096-201ENST00000583713 70 ntBASIC4.82□□□□□ -1.64
PDX1P52945 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.82□□□□□ -1.64
PDX1P52945 AL512782.1-201ENST00000603093 364 ntBASIC4.82□□□□□ -1.64
PDX1P52945 AC073137.1-201ENST00000605636 634 ntBASIC4.82□□□□□ -1.64
PDX1P52945 AC015849.2-201ENST00000605738 409 ntBASIC4.82□□□□□ -1.64
PDX1P52945 AC083809.1-201ENST00000615051 472 ntBASIC4.82□□□□□ -1.64
PDX1P52945 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
PDX1P52945 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
PDX1P52945 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.82□□□□□ -1.64
PDX1P52945 AC073136.1-201ENST00000449426 2884 ntBASIC4.82□□□□□ -1.64
PDX1P52945 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.82□□□□□ -1.64
PDX1P52945 PROS2P-201ENST00000474651 1951 ntBASIC4.82□□□□□ -1.64
PDX1P52945 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDX1P52945 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.81□□□□□ -1.64
PDX1P52945 AC097063.1-201ENST00000426714 1797 ntBASIC4.81□□□□□ -1.64
PDX1P52945 AC026951.1-201ENST00000559530 2459 ntBASIC4.81□□□□□ -1.64
PDX1P52945 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDX1P52945 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms