Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 PSG10P-201ENST00000501199 1500 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 MRE11P1-201ENST00000464884 2127 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AP000776.1-201ENST00000530032 1663 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 SNORA21-201ENST00000362423 132 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 Y_RNA.41-201ENST00000362646 102 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 snoZ40.1-201ENST00000364540 72 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 SNORA62.2-201ENST00000364672 152 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 RNU1-74P-201ENST00000384108 171 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 RNU6-549P-201ENST00000384433 107 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 MIR188-201ENST00000385034 86 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 RN7SKP263-201ENST00000411194 309 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC023128.2-201ENST00000420880 1223 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 RPL7AP51-201ENST00000422016 760 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AL139421.1-201ENST00000423010 169 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 MED14P1-201ENST00000430517 648 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC073410.1-201ENST00000435125 589 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC096632.2-201ENST00000438139 1239 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 UBE2V1P7-201ENST00000446395 340 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 IGBP1P3-201ENST00000447449 1000 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC097359.1-201ENST00000447946 463 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC243772.1-201ENST00000451620 410 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC002553.3-201ENST00000453002 341 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 ACA64.4-201ENST00000459070 127 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 CR383656.1-201ENST00000484916 377 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC106822.1-201ENST00000502647 526 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC084024.2-201ENST00000503480 791 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC104090.1-201ENST00000506341 1171 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 PGBD4P4-201ENST00000509673 613 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 HNRNPKP5-201ENST00000515300 253 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 RNU6-405P-201ENST00000516637 110 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 RNU6-678P-201ENST00000516832 109 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC116917.1-201ENST00000520558 305 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AL139174.1-201ENST00000531489 886 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC007954.1-201ENST00000554198 494 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 NPM1P47-201ENST00000560843 856 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC090525.3-201ENST00000605601 189 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC097505.1-201ENST00000610199 565 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AL592148.2-201ENST00000612210 372 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 Z99129.1-201ENST00000612510 255 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 RFPL4AP6-201ENST00000616792 846 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC073569.3-201ENST00000619055 682 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 PWAR1-201ENST00000624188 2414 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC093225.1-201ENST00000506867 1408 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
CGB1A6NKQ9 AC017007.4-201ENST00000503353 1352 ntBASIC4.78□□□□□ -1.64
CGB1A6NKQ9 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
CGB1A6NKQ9 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CGB1A6NKQ9 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CGB1A6NKQ9 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CGB1A6NKQ9 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.77□□□□□ -1.65
CGB1A6NKQ9 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.77□□□□□ -1.65
CGB1A6NKQ9 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms