Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 Y_RNA.60-201ENST00000362831 98 ntBASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 RPL23AP32-201ENST00000395315 459 ntBASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 AL591416.1-201ENST00000404015 867 ntBASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 MRPL32P1-201ENST00000406301 247 ntBASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 RN7SKP148-201ENST00000410179 275 ntBASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 RNA5SP280-201ENST00000411230 115 ntBASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 METTL15P3-201ENST00000415522 1221 ntBASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 AL354983.1-201ENST00000434580 906 ntBASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 AC104306.1-201ENST00000449702 371 ntBASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 AC067942.3-201ENST00000512025 362 ntBASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 DCAF13P2-201ENST00000514188 555 ntBASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 AP001180.3-201ENST00000582221 145 ntBASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 RPL26P30-202ENST00000602923 645 ntBASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 AC006157.1-201ENST00000611750 366 ntBASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 MIR8062-201ENST00000621515 85 ntBASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 ATM-230ENST00000640388 578 ntTSL 5 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 AL596275.2-203ENST00000641951 371 ntBASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 SSXP3-201ENST00000442971 1300 ntBASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 AC013268.3-201ENST00000262716 2324 ntBASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 AC011755.1-201ENST00000623763 2049 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 Y_RNA.252-201ENST00000364556 101 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 RNY1P14-201ENST00000384426 108 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 RNU6-1081P-201ENST00000384537 107 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 MIR99A-201ENST00000384906 81 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 RNU1-56P-201ENST00000391303 164 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 GAPDHP69-201ENST00000425504 1008 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 AL121916.1-201ENST00000429405 308 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 AC018804.1-201ENST00000430381 618 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 SDHCP3-201ENST00000445371 506 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 MTND3P16-201ENST00000452205 344 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 BTF3P5-201ENST00000457252 467 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 PFN1P6-201ENST00000476786 399 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 AC091849.1-201ENST00000509920 121 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 RPL39P5-202ENST00000512505 151 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 Y_RNA.665-201ENST00000516177 98 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 RNU6-864P-201ENST00000516256 108 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 CARSP2-201ENST00000520688 277 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 AP005435.4-201ENST00000529514 284 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 AC069061.3-201ENST00000582254 823 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 AC090312.2-201ENST00000582687 378 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 AC018926.3-201ENST00000618841 406 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 AC007546.1-201ENST00000619452 559 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 AC119674.1-212ENST00000641155 993 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 Z83820.1-201ENST00000456978 1499 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 AC020978.6-201ENST00000571197 3177 ntBASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM35Q9UPQ4 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms