Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.14□□□□□ -1.43
NUP88Q99567 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.14□□□□□ -1.43
NUP88Q99567 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.14□□□□□ -1.43
NUP88Q99567 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC6.14□□□□□ -1.43
NUP88Q99567 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.14□□□□□ -1.43
NUP88Q99567 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.14□□□□□ -1.43
NUP88Q99567 AC027455.1-201ENST00000574104 594 ntBASIC6.14□□□□□ -1.43
NUP88Q99567 AC022884.3-201ENST00000579571 248 ntBASIC6.14□□□□□ -1.43
NUP88Q99567 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
NUP88Q99567 AC005252.1-201ENST00000604518 1063 ntBASIC6.14□□□□□ -1.43
NUP88Q99567 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
NUP88Q99567 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
NUP88Q99567 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NUP88Q99567 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.14□□□□□ -1.43
NUP88Q99567 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.14□□□□□ -1.43
NUP88Q99567 AC131971.1-201ENST00000332881 1482 ntBASIC6.14□□□□□ -1.43
NUP88Q99567 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NUP88Q99567 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NUP88Q99567 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NUP88Q99567 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NUP88Q99567 AL442128.2-201ENST00000620246 1824 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
NUP88Q99567 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP88Q99567 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP88Q99567 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NUP88Q99567 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.13□□□□□ -1.43
NUP88Q99567 METTL21EP-201ENST00000298105 713 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 U3.3-201ENST00000362986 216 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 MIR600-201ENST00000385007 98 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 Y_RNA.578-201ENST00000390903 88 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 RNU6-932P-201ENST00000391108 106 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP88Q99567 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
NUP88Q99567 AC092638.1-201ENST00000411966 1275 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.13□□□□□ -1.43
NUP88Q99567 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP88Q99567 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP88Q99567 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.13□□□□□ -1.43
NUP88Q99567 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.13□□□□□ -1.43
NUP88Q99567 RBMY2QP-201ENST00000429799 1147 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 FTH1P16-201ENST00000435241 552 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP88Q99567 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.13□□□□□ -1.43
NUP88Q99567 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP88Q99567 AC092647.3-201ENST00000443044 633 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 RPL31P44-201ENST00000447680 377 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 OR51B8P-201ENST00000449892 769 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 ZNF736P8Y-201ENST00000451913 669 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP88Q99567 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP88Q99567 RPL7P40-201ENST00000481703 745 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP88Q99567 RPS3AP6-201ENST00000484430 795 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 RN7SL97P-201ENST00000486780 299 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 AC005412.2-201ENST00000492004 341 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 AC021146.5-201ENST00000503544 545 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP88Q99567 IMPA1P1-201ENST00000510718 842 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 AC093752.1-206ENST00000511823 336 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 AC004980.4-201ENST00000513375 203 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 RN7SKP147-201ENST00000517154 244 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 RNU6-1028P-201ENST00000517164 93 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 AC092490.3-201ENST00000545370 572 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP88Q99567 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NUP88Q99567 AC122134.1-201ENST00000565664 1104 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 ATP5F1P7-201ENST00000567330 760 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP88Q99567 CLIC4P2-201ENST00000601934 717 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.13□□□□□ -1.43
NUP88Q99567 AL450336.1-201ENST00000605180 586 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 AL451049.1-201ENST00000608672 497 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 OR2BH1P-201ENST00000608850 864 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 AC010632.3-201ENST00000611377 369 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP88Q99567 AC007342.8-201ENST00000623278 678 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 AC099494.2-201ENST00000623371 978 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUP88Q99567 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.13□□□□□ -1.43
NUP88Q99567 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP88Q99567 HSPA8P18-201ENST00000439846 1928 ntBASIC6.13□□□□□ -1.43
NUP88Q99567 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.13□□□□□ -1.43
NUP88Q99567 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUP88Q99567 AC103591.2-201ENST00000265259 766 ntBASIC6.12□□□□□ -1.43
NUP88Q99567 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NUP88Q99567 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NUP88Q99567 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NUP88Q99567 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NUP88Q99567 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NUP88Q99567 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NUP88Q99567 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NUP88Q99567 RPL23AP59-201ENST00000399415 461 ntBASIC6.12□□□□□ -1.43
NUP88Q99567 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.12□□□□□ -1.43
NUP88Q99567 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NUP88Q99567 USP9YP21-201ENST00000420603 432 ntBASIC6.12□□□□□ -1.43
NUP88Q99567 AC092648.1-201ENST00000425870 423 ntBASIC6.12□□□□□ -1.43
NUP88Q99567 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.12□□□□□ -1.43
NUP88Q99567 MTND2P5-201ENST00000432656 1006 ntBASIC6.12□□□□□ -1.43
NUP88Q99567 USP9YP24-201ENST00000434374 697 ntBASIC6.12□□□□□ -1.43
NUP88Q99567 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms