Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 RN7SKP145-201ENST00000363291 303 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 SNORA70.6-201ENST00000383934 134 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 MIR513B-201ENST00000385136 84 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 RNU1-77P-201ENST00000390868 162 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AL133388.1-201ENST00000404509 287 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AC079809.1-201ENST00000415468 276 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 LINC01881-201ENST00000416103 412 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 MTCO2P21-201ENST00000419780 677 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 GSTM5P1-201ENST00000434751 660 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 FTH1P16-201ENST00000435241 552 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 MTCYBP31-201ENST00000438855 1122 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AL359265.1-201ENST00000440296 795 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 MED28P3-201ENST00000444288 531 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AL050341.1-201ENST00000447743 313 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 RN7SL515P-201ENST00000463999 297 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AC119751.1-201ENST00000513357 765 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 OR4A43P-201ENST00000532938 908 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 BLZF2P-201ENST00000553776 1130 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 OR4U1P-201ENST00000554958 912 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AC009097.3-201ENST00000563557 1018 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AC095057.3-201ENST00000567102 1157 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 MIR548Y-201ENST00000582739 110 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AC005840.5-201ENST00000619166 599 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 MTND2P41-201ENST00000637599 773 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AC073055.1-201ENST00000456901 1621 ntBASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.04□□□□□ -1.6
DTX4Q9Y2E6 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 SEC63P2-201ENST00000503863 1939 ntBASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 BCORP1-203ENST00000513194 5093 ntBASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 AL606537.1-201ENST00000607258 2011 ntBASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 RN7SKP160-201ENST00000363804 340 ntBASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 RNA5SP335-201ENST00000363817 110 ntBASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 DBIP1-201ENST00000401435 260 ntBASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 OR3A2-201ENST00000408891 1076 ntBASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 RPL35AP24-201ENST00000413846 330 ntBASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 AL136231.1-201ENST00000429407 730 ntBASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 NPM1P18-201ENST00000434232 732 ntBASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 MTND2P40-201ENST00000436718 841 ntBASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 CYCSP12-201ENST00000437729 300 ntBASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 Z77249.1-201ENST00000444622 1175 ntBASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 AC023271.1-201ENST00000445936 1090 ntBASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 AC105399.1-202ENST00000447303 205 ntBASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.03□□□□□ -1.6
DTX4Q9Y2E6 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms