Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC234775.3-201ENST00000564612 656 ntBASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 MIR4737-201ENST00000583979 81 ntBASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 AC005520.3-201ENST00000602874 370 ntBASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 AC087283.1-201ENST00000604029 1074 ntBASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 IMMP1LP1-201ENST00000605170 488 ntBASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 AC234782.5-201ENST00000617723 324 ntBASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 AL672167.1-205ENST00000641112 3080 ntBASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 OR10J6P-201ENST00000289731 930 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 OR56B2P-201ENST00000317102 954 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 AC019155.1-201ENST00000382242 574 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 RNU6-1320P-201ENST00000390838 107 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 RNU6-1269P-201ENST00000391139 107 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 FABP7P1-201ENST00000424004 391 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 AC097523.2-201ENST00000435551 652 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 AC005154.2-201ENST00000438110 379 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 RNU6-599P-201ENST00000459383 107 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 RNU6-1193P-201ENST00000459461 107 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 RN7SL809P-201ENST00000482040 297 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 RNU2-30P-201ENST00000516209 141 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 AC018442.3-201ENST00000523025 183 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 AL110118.1-201ENST00000553543 400 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 MIR4436B2-201ENST00000581415 91 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 MIR4436B1-201ENST00000583272 91 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 MIR6853-201ENST00000619642 74 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 RNU6-368P-201ENST00000620928 107 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 RNU6-538P-201ENST00000622329 107 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 AC091046.3-201ENST00000631455 1574 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 AC126323.6-202ENST00000568092 3511 ntBASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC65Q8IXS2 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 AC140479.3-201ENST00000418944 1126 ntBASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 AC008072.1-201ENST00000434254 824 ntBASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 AC098799.3-201ENST00000506095 438 ntBASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 UBE2FP2-201ENST00000566646 462 ntBASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 AC015912.2-201ENST00000571053 181 ntBASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 AC091042.1-201ENST00000579213 173 ntBASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 AL021707.7-201ENST00000607991 416 ntBASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 AL353600.1-201ENST00000608148 251 ntBASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC65Q8IXS2 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 MAPK10-303ENST00000641324 3959 ntBASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 A2MP1-204ENST00000566278 4130 ntBASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 Z98745.1-201ENST00000402553 494 ntBASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 AC004690.1-201ENST00000418216 328 ntBASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 AC006455.6-201ENST00000426192 893 ntBASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 RPL5P30-201ENST00000465511 891 ntBASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC65Q8IXS2 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms