Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 EIF2S2P5-201ENST00000457635 968 ntBASIC7.57□□□□□ -1.2
CFTRP13569 AL049874.2-201ENST00000492636 288 ntBASIC7.57□□□□□ -1.2
CFTRP13569 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC7.57□□□□□ -1.2
CFTRP13569 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CFTRP13569 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC7.57□□□□□ -1.2
CFTRP13569 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC7.57□□□□□ -1.2
CFTRP13569 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC7.57□□□□□ -1.2
CFTRP13569 AC069200.1-201ENST00000609511 323 ntBASIC7.57□□□□□ -1.2
CFTRP13569 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC7.57□□□□□ -1.2
CFTRP13569 OFD1P5Y-201ENST00000447585 2590 ntBASIC7.57□□□□□ -1.2
CFTRP13569 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CFTRP13569 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CFTRP13569 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CFTRP13569 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CFTRP13569 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CFTRP13569 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CFTRP13569 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
CFTRP13569 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CFTRP13569 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CFTRP13569 AC097374.1-203ENST00000400783 485 ntBASIC7.56□□□□□ -1.2
CFTRP13569 ARAFP1-201ENST00000422172 605 ntBASIC7.56□□□□□ -1.2
CFTRP13569 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC7.56□□□□□ -1.2
CFTRP13569 AL500522.2-201ENST00000448562 343 ntBASIC7.56□□□□□ -1.2
CFTRP13569 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC7.56□□□□□ -1.2
CFTRP13569 MYL12BP2-201ENST00000503948 512 ntBASIC7.56□□□□□ -1.2
CFTRP13569 OR5BC1P-201ENST00000529327 739 ntBASIC7.56□□□□□ -1.2
CFTRP13569 AC015804.1-201ENST00000622935 435 ntBASIC7.56□□□□□ -1.2
CFTRP13569 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC7.56□□□□□ -1.2
CFTRP13569 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CFTRP13569 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CFTRP13569 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CFTRP13569 WAC-209ENST00000428935 1320 ntTSL 2 BASIC7.56□□□□□ -1.2
CFTRP13569 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
CFTRP13569 TEK-205ENST00000615002 4666 ntTSL 5 BASIC7.56□□□□□ -1.2
CFTRP13569 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
CFTRP13569 LDHAL6CP-202ENST00000550738 3224 ntBASIC7.56□□□□□ -1.2
CFTRP13569 AC093578.1-201ENST00000415219 368 ntBASIC7.55□□□□□ -1.2
CFTRP13569 OR8F1P-201ENST00000425243 930 ntBASIC7.55□□□□□ -1.2
CFTRP13569 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC7.55□□□□□ -1.2
CFTRP13569 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC7.55□□□□□ -1.2
CFTRP13569 MIR3944-201ENST00000581277 108 ntBASIC7.55□□□□□ -1.2
CFTRP13569 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.55□□□□□ -1.2
CFTRP13569 AC139769.1-204ENST00000472297 1931 ntBASIC7.55□□□□□ -1.2
CFTRP13569 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
CFTRP13569 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CFTRP13569 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CFTRP13569 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CFTRP13569 AL450345.1-202ENST00000605741 3881 ntBASIC7.55□□□□□ -1.2
CFTRP13569 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CFTRP13569 CRYBB2P1-203ENST00000415709 538 ntBASIC7.55□□□□□ -1.2
CFTRP13569 ARAFP2-201ENST00000440565 559 ntBASIC7.55□□□□□ -1.2
CFTRP13569 RPS27AP17-201ENST00000463344 455 ntBASIC7.55□□□□□ -1.2
CFTRP13569 PGBD4P4-201ENST00000509673 613 ntBASIC7.55□□□□□ -1.2
CFTRP13569 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC7.55□□□□□ -1.2
CFTRP13569 NPM1P21-201ENST00000513394 762 ntBASIC7.55□□□□□ -1.2
CFTRP13569 IGLVVI-25-1-201ENST00000521893 249 ntBASIC7.55□□□□□ -1.2
CFTRP13569 OR7E10P-201ENST00000526420 991 ntBASIC7.55□□□□□ -1.2
CFTRP13569 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC7.55□□□□□ -1.2
CFTRP13569 TEX41-300ENST00000631048 69 ntTSL 5 BASIC7.55□□□□□ -1.2
CFTRP13569 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CFTRP13569 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CFTRP13569 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CFTRP13569 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CFTRP13569 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC7.54□□□□□ -1.2
CFTRP13569 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CFTRP13569 ACTR3BP5-201ENST00000448440 1479 ntBASIC7.54□□□□□ -1.2
CFTRP13569 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CFTRP13569 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.54□□□□□ -1.2
CFTRP13569 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.54□□□□□ -1.2
CFTRP13569 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC7.54□□□□□ -1.2
CFTRP13569 SUMO2P19-201ENST00000518920 295 ntBASIC7.54□□□□□ -1.2
CFTRP13569 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC7.54□□□□□ -1.2
CFTRP13569 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC7.54□□□□□ -1.2
CFTRP13569 AC025175.1-201ENST00000606482 759 ntBASIC7.54□□□□□ -1.2
CFTRP13569 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
CFTRP13569 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
CFTRP13569 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.53□□□□□ -1.2
CFTRP13569 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CFTRP13569 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CFTRP13569 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CFTRP13569 Y_RNA.333-201ENST00000365274 102 ntBASIC7.53□□□□□ -1.2
CFTRP13569 SNORA74C-2-201ENST00000411179 201 ntBASIC7.53□□□□□ -1.2
CFTRP13569 AC069157.1-201ENST00000421749 137 ntBASIC7.53□□□□□ -1.2
CFTRP13569 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC7.53□□□□□ -1.2
CFTRP13569 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC7.53□□□□□ -1.2
CFTRP13569 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC7.53□□□□□ -1.2
CFTRP13569 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC7.53□□□□□ -1.2
CFTRP13569 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC7.53□□□□□ -1.2
CFTRP13569 AC010460.1-201ENST00000507087 466 ntBASIC7.53□□□□□ -1.2
CFTRP13569 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC7.53□□□□□ -1.2
CFTRP13569 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC7.53□□□□□ -1.2
CFTRP13569 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CFTRP13569 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
CFTRP13569 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CFTRP13569 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
CFTRP13569 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CFTRP13569 BCORP1-203ENST00000513194 5093 ntBASIC7.52□□□□□ -1.2
CFTRP13569 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CFTRP13569 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
CFTRP13569 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms