Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.57□□□□□ -1.68
LMX1BO60663 AC092647.3-201ENST00000443044 633 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 MTND2P22-201ENST00000444325 1033 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.57□□□□□ -1.68
LMX1BO60663 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.57□□□□□ -1.68
LMX1BO60663 RAB28P3-201ENST00000448325 597 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 AC073850.1-201ENST00000449243 255 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.57□□□□□ -1.68
LMX1BO60663 NDUFA5P9-201ENST00000472609 340 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 STRADBP1-201ENST00000478954 1281 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.57□□□□□ -1.68
LMX1BO60663 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.57□□□□□ -1.68
LMX1BO60663 AC008427.1-201ENST00000503102 655 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 SNRPCP2-201ENST00000504370 475 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LMX1BO60663 AC112518.2-201ENST00000508565 425 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.57□□□□□ -1.68
LMX1BO60663 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.57□□□□□ -1.68
LMX1BO60663 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LMX1BO60663 AC091163.3-201ENST00000518269 1144 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.57□□□□□ -1.68
LMX1BO60663 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.57□□□□□ -1.68
LMX1BO60663 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.57□□□□□ -1.68
LMX1BO60663 AC087894.1-201ENST00000538359 518 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.57□□□□□ -1.68
LMX1BO60663 MRPS36P5-201ENST00000551909 298 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LMX1BO60663 MTCYBP27-201ENST00000555160 670 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.57□□□□□ -1.68
LMX1BO60663 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.57□□□□□ -1.68
LMX1BO60663 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
LMX1BO60663 AC005341.1-201ENST00000571086 708 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 MIR4436B2-201ENST00000581415 91 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.57□□□□□ -1.68
LMX1BO60663 MIR4436B1-201ENST00000583272 91 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.57□□□□□ -1.68
LMX1BO60663 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.57□□□□□ -1.68
LMX1BO60663 GAS5-AS1-201ENST00000602767 694 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 AC005034.4-201ENST00000603612 899 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 AP002802.2-201ENST00000605877 235 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 AC012213.4-201ENST00000606457 354 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 AC100827.5-201ENST00000615883 426 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 AP002799.1-201ENST00000623552 423 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.57□□□□□ -1.68
LMX1BO60663 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.57□□□□□ -1.68
LMX1BO60663 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
LMX1BO60663 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
LMX1BO60663 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LMX1BO60663 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
LMX1BO60663 AC011493.1-201ENST00000596753 1632 ntBASIC4.57□□□□□ -1.68
LMX1BO60663 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LMX1BO60663 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
LMX1BO60663 AC133552.1-201ENST00000569988 4007 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LMX1BO60663 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.56□□□□□ -1.68
LMX1BO60663 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LMX1BO60663 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LMX1BO60663 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.56□□□□□ -1.68
LMX1BO60663 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LMX1BO60663 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LMX1BO60663 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.56□□□□□ -1.68
LMX1BO60663 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LMX1BO60663 MTHFD2P5-201ENST00000320415 844 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.56□□□□□ -1.68
LMX1BO60663 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LMX1BO60663 RNU6-468P-201ENST00000384003 109 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 TAS2R15P-201ENST00000390674 928 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
LMX1BO60663 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 AC211486.3-201ENST00000412694 621 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 AC098592.2-201ENST00000413158 265 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.56□□□□□ -1.68
LMX1BO60663 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.56□□□□□ -1.68
LMX1BO60663 AC093162.1-201ENST00000419682 124 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 RPA2P2-201ENST00000419698 796 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.56□□□□□ -1.68
LMX1BO60663 NANOGP5-201ENST00000424456 877 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.56□□□□□ -1.68
LMX1BO60663 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.56□□□□□ -1.68
LMX1BO60663 DSTNP5-201ENST00000427921 523 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LMX1BO60663 AL035246.1-201ENST00000433554 1255 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.56□□□□□ -1.68
LMX1BO60663 AC046176.1-201ENST00000435260 1170 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.56□□□□□ -1.68
LMX1BO60663 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.56□□□□□ -1.68
LMX1BO60663 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.56□□□□□ -1.68
LMX1BO60663 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.56□□□□□ -1.68
LMX1BO60663 MTCO1P53-201ENST00000441633 699 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 RPS11P7-201ENST00000442125 465 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.56□□□□□ -1.68
LMX1BO60663 AL591719.1-201ENST00000444669 744 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 AL031313.1-201ENST00000448435 256 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 GAPDHP14-201ENST00000450472 937 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.56□□□□□ -1.68
LMX1BO60663 AC096992.1-201ENST00000459808 709 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.56□□□□□ -1.68
LMX1BO60663 AC020779.1-201ENST00000478757 796 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 MTCO3P35-201ENST00000485582 781 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms