Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC245505.1-201ENST00000556398 224 ntBASIC6.84□□□□□ -1.31
NPAS4Q8IUM7 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.84□□□□□ -1.31
NPAS4Q8IUM7 AC012414.6-201ENST00000568241 401 ntBASIC6.84□□□□□ -1.31
NPAS4Q8IUM7 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.84□□□□□ -1.31
NPAS4Q8IUM7 AC011445.2-201ENST00000599274 173 ntBASIC6.84□□□□□ -1.31
NPAS4Q8IUM7 AC009237.12-201ENST00000604755 742 ntBASIC6.84□□□□□ -1.31
NPAS4Q8IUM7 AC138749.5-201ENST00000611461 208 ntBASIC6.84□□□□□ -1.31
NPAS4Q8IUM7 AC231657.1-201ENST00000624313 397 ntBASIC6.84□□□□□ -1.31
NPAS4Q8IUM7 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
NPAS4Q8IUM7 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NPAS4Q8IUM7 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NPAS4Q8IUM7 AL079343.1-201ENST00000572358 1771 ntBASIC6.84□□□□□ -1.31
NPAS4Q8IUM7 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NPAS4Q8IUM7 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NPAS4Q8IUM7 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NPAS4Q8IUM7 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
NPAS4Q8IUM7 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.84□□□□□ -1.32
NPAS4Q8IUM7 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
NPAS4Q8IUM7 AC004520.1-201ENST00000608362 1413 ntBASIC6.84□□□□□ -1.32
NPAS4Q8IUM7 CR848007.1-201ENST00000442354 1699 ntBASIC6.84□□□□□ -1.32
NPAS4Q8IUM7 AC009313.2-201ENST00000417893 1941 ntBASIC6.84□□□□□ -1.32
NPAS4Q8IUM7 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 TCP11X1-202ENST00000622971 1372 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 AL359976.1-201ENST00000418655 3528 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 MAPK10-287ENST00000641217 3037 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 Y_RNA.359-201ENST00000365498 102 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 RN7SKP81-201ENST00000365603 331 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 SNORA17A-201ENST00000391185 133 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 OR6C69P-201ENST00000394268 893 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 RPS7P14-201ENST00000426405 583 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 B3GNT2P1-201ENST00000434960 952 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 AC002553.3-201ENST00000453002 341 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 RPS15AP1-201ENST00000457423 391 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 RN7SL705P-201ENST00000481678 294 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 AHI1-208ENST00000488690 712 ntTSL 5 BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 UBA52P3-201ENST00000491303 382 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 AC106872.4-201ENST00000510050 523 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 RNU6-405P-201ENST00000516637 110 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 RNA5SP271-201ENST00000516700 88 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 SNORA81.2-201ENST00000516868 170 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 IGKV1D-22-201ENST00000518953 324 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 DUXAP2-201ENST00000519198 589 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 IGLV3-6-201ENST00000523937 250 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 AC087276.1-201ENST00000529659 480 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 AC068768.2-201ENST00000602352 343 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 AC027243.2-201ENST00000602530 724 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 AL953862.2-201ENST00000603089 820 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 AC018816.2-201ENST00000621460 353 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 SNORA17.5-201ENST00000630429 132 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 OR11H2-202ENST00000641517 1085 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 CYP2G2P-201ENST00000594920 1485 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 AL596244.1-201ENST00000567068 3779 ntBASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NPAS4Q8IUM7 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 MTCO1P14-201ENST00000441695 1559 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AL391261.1-201ENST00000555712 1479 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 SNORA21-201ENST00000362423 132 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 RNU6-462P-201ENST00000362659 105 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 RPS3AP24-201ENST00000407896 734 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 RPL17P12-201ENST00000413391 526 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 ATG4AP1-201ENST00000416893 538 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AK4P4-201ENST00000419465 646 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 NME1P1-201ENST00000420914 382 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AC004448.2-201ENST00000422360 586 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AL389915.1-201ENST00000422463 466 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms