Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RPL26P37-201ENST00000411983 438 ntBASIC4.88□□□□□ -1.63
PDX1P52945 AC234781.4-201ENST00000419384 244 ntBASIC4.88□□□□□ -1.63
PDX1P52945 AC004074.1-201ENST00000421810 1063 ntBASIC4.88□□□□□ -1.63
PDX1P52945 AL121882.1-201ENST00000422893 417 ntBASIC4.88□□□□□ -1.63
PDX1P52945 AC093414.1-201ENST00000434712 514 ntBASIC4.88□□□□□ -1.63
PDX1P52945 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.88□□□□□ -1.63
PDX1P52945 RPL12P18-201ENST00000437175 325 ntBASIC4.88□□□□□ -1.63
PDX1P52945 AC006326.1-201ENST00000445465 787 ntBASIC4.88□□□□□ -1.63
PDX1P52945 OR52J1P-201ENST00000450596 932 ntBASIC4.88□□□□□ -1.63
PDX1P52945 IGHV5-78-201ENST00000450948 295 ntBASIC4.88□□□□□ -1.63
PDX1P52945 AC020779.1-201ENST00000478757 796 ntBASIC4.88□□□□□ -1.63
PDX1P52945 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.88□□□□□ -1.63
PDX1P52945 RN7SL244P-201ENST00000493405 297 ntBASIC4.88□□□□□ -1.63
PDX1P52945 AC097173.1-201ENST00000505862 819 ntBASIC4.88□□□□□ -1.63
PDX1P52945 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.88□□□□□ -1.63
PDX1P52945 AC004923.2-201ENST00000529649 369 ntBASIC4.88□□□□□ -1.63
PDX1P52945 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.88□□□□□ -1.63
PDX1P52945 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.88□□□□□ -1.63
PDX1P52945 AC093014.1-201ENST00000548926 724 ntBASIC4.88□□□□□ -1.63
PDX1P52945 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PDX1P52945 AC233266.2-201ENST00000567067 528 ntBASIC4.88□□□□□ -1.63
PDX1P52945 AC022884.2-201ENST00000578535 580 ntBASIC4.88□□□□□ -1.63
PDX1P52945 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDX1P52945 MIR3667-201ENST00000581025 74 ntBASIC4.88□□□□□ -1.63
PDX1P52945 AC015911.5-201ENST00000587076 451 ntBASIC4.88□□□□□ -1.63
PDX1P52945 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.88□□□□□ -1.63
PDX1P52945 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.88□□□□□ -1.63
PDX1P52945 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.88□□□□□ -1.63
PDX1P52945 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.88□□□□□ -1.63
PDX1P52945 AC012557.1-201ENST00000607115 611 ntBASIC4.88□□□□□ -1.63
PDX1P52945 AL645927.2-201ENST00000618350 349 ntBASIC4.88□□□□□ -1.63
PDX1P52945 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.88□□□□□ -1.63
PDX1P52945 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.88□□□□□ -1.63
PDX1P52945 AC073869.10-201ENST00000642016 354 ntBASIC4.88□□□□□ -1.63
PDX1P52945 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PDX1P52945 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.88□□□□□ -1.63
PDX1P52945 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PDX1P52945 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDX1P52945 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDX1P52945 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.88□□□□□ -1.63
PDX1P52945 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDX1P52945 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDX1P52945 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDX1P52945 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDX1P52945 SMG1P7-201ENST00000565246 2704 ntBASIC4.88□□□□□ -1.63
PDX1P52945 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.88□□□□□ -1.63
PDX1P52945 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PDX1P52945 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDX1P52945 AC092376.2-201ENST00000622621 4116 ntBASIC4.87□□□□□ -1.63
PDX1P52945 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDX1P52945 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.87□□□□□ -1.63
PDX1P52945 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDX1P52945 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.87□□□□□ -1.63
PDX1P52945 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDX1P52945 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDX1P52945 AC079741.1-201ENST00000321498 212 ntBASIC4.87□□□□□ -1.63
PDX1P52945 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PDX1P52945 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDX1P52945 RNU6-792P-201ENST00000363490 107 ntBASIC4.87□□□□□ -1.63
PDX1P52945 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
PDX1P52945 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDX1P52945 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.87□□□□□ -1.63
PDX1P52945 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.87□□□□□ -1.63
PDX1P52945 AC092570.3-201ENST00000420113 693 ntBASIC4.87□□□□□ -1.63
PDX1P52945 AC013410.2-201ENST00000422627 201 ntBASIC4.87□□□□□ -1.63
PDX1P52945 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.87□□□□□ -1.63
PDX1P52945 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PDX1P52945 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.87□□□□□ -1.63
PDX1P52945 AL161722.2-201ENST00000434731 981 ntBASIC4.87□□□□□ -1.63
PDX1P52945 AC093716.1-201ENST00000435923 377 ntBASIC4.87□□□□□ -1.63
PDX1P52945 MTCYBP29-201ENST00000436327 1006 ntBASIC4.87□□□□□ -1.63
PDX1P52945 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.87□□□□□ -1.63
PDX1P52945 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.87□□□□□ -1.63
PDX1P52945 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.87□□□□□ -1.63
PDX1P52945 AL137845.2-201ENST00000444292 988 ntBASIC4.87□□□□□ -1.63
PDX1P52945 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.87□□□□□ -1.63
PDX1P52945 FTH1P2-201ENST00000466086 412 ntBASIC4.87□□□□□ -1.63
PDX1P52945 RN7SL189P-201ENST00000468631 289 ntBASIC4.87□□□□□ -1.63
PDX1P52945 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDX1P52945 AC104629.1-201ENST00000494226 508 ntBASIC4.87□□□□□ -1.63
PDX1P52945 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.87□□□□□ -1.63
PDX1P52945 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.87□□□□□ -1.63
PDX1P52945 AC010350.1-201ENST00000504908 231 ntBASIC4.87□□□□□ -1.63
PDX1P52945 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.87□□□□□ -1.63
PDX1P52945 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.87□□□□□ -1.63
PDX1P52945 C1GALT1P3-201ENST00000522049 819 ntBASIC4.87□□□□□ -1.63
PDX1P52945 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.87□□□□□ -1.63
PDX1P52945 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.87□□□□□ -1.63
PDX1P52945 DUX4L52-201ENST00000549363 777 ntBASIC4.87□□□□□ -1.63
PDX1P52945 AC091042.1-201ENST00000579213 173 ntBASIC4.87□□□□□ -1.63
PDX1P52945 MIR4660-201ENST00000583549 74 ntBASIC4.87□□□□□ -1.63
PDX1P52945 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.87□□□□□ -1.63
PDX1P52945 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.87□□□□□ -1.63
PDX1P52945 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.87□□□□□ -1.63
PDX1P52945 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.87□□□□□ -1.63
PDX1P52945 SNX6P1-201ENST00000601728 1224 ntBASIC4.87□□□□□ -1.63
PDX1P52945 AL096803.3-201ENST00000609032 532 ntBASIC4.87□□□□□ -1.63
PDX1P52945 AC004241.3-201ENST00000611728 517 ntBASIC4.87□□□□□ -1.63
PDX1P52945 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDX1P52945 RPL23AP61-201ENST00000623642 466 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms