Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.26□□□□□ -1.57
HADHAP40939 RPL6P5-201ENST00000445678 828 ntBASIC5.26□□□□□ -1.57
HADHAP40939 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.26□□□□□ -1.57
HADHAP40939 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.26□□□□□ -1.57
HADHAP40939 RPS26P41-201ENST00000450370 284 ntBASIC5.26□□□□□ -1.57
HADHAP40939 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HADHAP40939 RN7SL799P-201ENST00000475891 298 ntBASIC5.26□□□□□ -1.57
HADHAP40939 SETP6-201ENST00000479329 568 ntBASIC5.26□□□□□ -1.57
HADHAP40939 AC069304.1-201ENST00000491593 704 ntBASIC5.26□□□□□ -1.57
HADHAP40939 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HADHAP40939 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.26□□□□□ -1.57
HADHAP40939 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.26□□□□□ -1.57
HADHAP40939 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.26□□□□□ -1.57
HADHAP40939 RNA5SP373-201ENST00000517271 95 ntBASIC5.26□□□□□ -1.57
HADHAP40939 AC012400.1-201ENST00000518452 381 ntBASIC5.26□□□□□ -1.57
HADHAP40939 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.26□□□□□ -1.57
HADHAP40939 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.26□□□□□ -1.57
HADHAP40939 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.26□□□□□ -1.57
HADHAP40939 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.26□□□□□ -1.57
HADHAP40939 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.26□□□□□ -1.57
HADHAP40939 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.26□□□□□ -1.57
HADHAP40939 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HADHAP40939 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HADHAP40939 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.26□□□□□ -1.57
HADHAP40939 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.26□□□□□ -1.57
HADHAP40939 MIR3908-201ENST00000579798 126 ntBASIC5.26□□□□□ -1.57
HADHAP40939 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.26□□□□□ -1.57
HADHAP40939 MIR548Y-201ENST00000582739 110 ntBASIC5.26□□□□□ -1.57
HADHAP40939 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.26□□□□□ -1.57
HADHAP40939 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.26□□□□□ -1.57
HADHAP40939 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.26□□□□□ -1.57
HADHAP40939 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.26□□□□□ -1.57
HADHAP40939 AC069307.1-201ENST00000602820 447 ntBASIC5.26□□□□□ -1.57
HADHAP40939 AC011374.2-201ENST00000607135 526 ntBASIC5.26□□□□□ -1.57
HADHAP40939 BX005214.3-202ENST00000619809 325 ntBASIC5.26□□□□□ -1.57
HADHAP40939 AC136428.4-201ENST00000634254 1155 ntBASIC5.26□□□□□ -1.57
HADHAP40939 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.26□□□□□ -1.57
HADHAP40939 AC073136.1-201ENST00000449426 2884 ntBASIC5.26□□□□□ -1.57
HADHAP40939 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HADHAP40939 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HADHAP40939 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
HADHAP40939 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HADHAP40939 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
HADHAP40939 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HADHAP40939 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.25□□□□□ -1.57
HADHAP40939 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HADHAP40939 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HADHAP40939 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HADHAP40939 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HADHAP40939 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HADHAP40939 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HADHAP40939 MIR223-201ENST00000385204 110 ntBASIC5.25□□□□□ -1.57
HADHAP40939 ATP5F1P6-201ENST00000402768 767 ntBASIC5.25□□□□□ -1.57
HADHAP40939 SETP15-201ENST00000412724 337 ntBASIC5.25□□□□□ -1.57
HADHAP40939 AL590609.2-201ENST00000421430 368 ntBASIC5.25□□□□□ -1.57
HADHAP40939 AC104333.2-201ENST00000422630 192 ntBASIC5.25□□□□□ -1.57
HADHAP40939 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.25□□□□□ -1.57
HADHAP40939 FO393419.3-201ENST00000428741 282 ntBASIC5.25□□□□□ -1.57
HADHAP40939 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.25□□□□□ -1.57
HADHAP40939 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.25□□□□□ -1.57
HADHAP40939 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.25□□□□□ -1.57
HADHAP40939 AC097499.1-201ENST00000444277 208 ntBASIC5.25□□□□□ -1.57
HADHAP40939 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.25□□□□□ -1.57
HADHAP40939 AC069540.1-201ENST00000446320 988 ntBASIC5.25□□□□□ -1.57
HADHAP40939 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.25□□□□□ -1.57
HADHAP40939 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.25□□□□□ -1.57
HADHAP40939 HMGB1P4-201ENST00000455362 567 ntBASIC5.25□□□□□ -1.57
HADHAP40939 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.25□□□□□ -1.57
HADHAP40939 RPL7P48-201ENST00000461513 746 ntBASIC5.25□□□□□ -1.57
HADHAP40939 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.25□□□□□ -1.57
HADHAP40939 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.25□□□□□ -1.57
HADHAP40939 RPS4XP20-201ENST00000505751 772 ntBASIC5.25□□□□□ -1.57
HADHAP40939 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.25□□□□□ -1.57
HADHAP40939 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.25□□□□□ -1.57
HADHAP40939 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.25□□□□□ -1.57
HADHAP40939 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.25□□□□□ -1.57
HADHAP40939 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.25□□□□□ -1.57
HADHAP40939 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.25□□□□□ -1.57
HADHAP40939 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HADHAP40939 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.25□□□□□ -1.57
HADHAP40939 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.25□□□□□ -1.57
HADHAP40939 AC135068.12-201ENST00000637370 931 ntBASIC5.25□□□□□ -1.57
HADHAP40939 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HADHAP40939 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
HADHAP40939 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.25□□□□□ -1.57
HADHAP40939 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
HADHAP40939 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HADHAP40939 AC104118.1-201ENST00000607625 1589 ntBASIC5.25□□□□□ -1.57
HADHAP40939 AC009229.4-201ENST00000623854 1947 ntBASIC5.25□□□□□ -1.57
HADHAP40939 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HADHAP40939 AC235565.1-201ENST00000456962 1325 ntBASIC5.24□□□□□ -1.57
HADHAP40939 AC114947.2-201ENST00000565748 2125 ntBASIC5.24□□□□□ -1.57
HADHAP40939 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.24□□□□□ -1.57
HADHAP40939 AP000542.2-201ENST00000623199 6179 ntBASIC5.24□□□□□ -1.57
HADHAP40939 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HADHAP40939 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.24□□□□□ -1.57
HADHAP40939 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HADHAP40939 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HADHAP40939 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.24□□□□□ -1.57
HADHAP40939 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms