Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.66□□□□□ -1.66
RORAP35398 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.66□□□□□ -1.66
RORAP35398 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.66□□□□□ -1.66
RORAP35398 AP000936.3-201ENST00000438127 255 ntBASIC4.66□□□□□ -1.66
RORAP35398 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.66□□□□□ -1.66
RORAP35398 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.66□□□□□ -1.66
RORAP35398 RPL23AP56-201ENST00000460778 453 ntBASIC4.66□□□□□ -1.66
RORAP35398 AC116562.1-201ENST00000485355 781 ntBASIC4.66□□□□□ -1.66
RORAP35398 AC011005.3-201ENST00000491624 395 ntBASIC4.66□□□□□ -1.66
RORAP35398 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.66□□□□□ -1.66
RORAP35398 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RORAP35398 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.66□□□□□ -1.66
RORAP35398 RNU4-18P-201ENST00000516751 149 ntBASIC4.66□□□□□ -1.66
RORAP35398 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.66□□□□□ -1.66
RORAP35398 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.66□□□□□ -1.66
RORAP35398 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.66□□□□□ -1.66
RORAP35398 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.66□□□□□ -1.66
RORAP35398 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.66□□□□□ -1.66
RORAP35398 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.66□□□□□ -1.66
RORAP35398 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.66□□□□□ -1.66
RORAP35398 AC068790.7-201ENST00000602347 528 ntBASIC4.66□□□□□ -1.66
RORAP35398 AC015871.5-202ENST00000623252 701 ntBASIC4.66□□□□□ -1.66
RORAP35398 AP000648.2-201ENST00000624182 404 ntBASIC4.66□□□□□ -1.66
RORAP35398 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RORAP35398 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RORAP35398 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.66□□□□□ -1.66
RORAP35398 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RORAP35398 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RORAP35398 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.65□□□□□ -1.66
RORAP35398 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
RORAP35398 AL022393.1-201ENST00000625142 1677 ntBASIC4.65□□□□□ -1.66
RORAP35398 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.65□□□□□ -1.66
RORAP35398 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RORAP35398 AC013442.1-201ENST00000397347 228 ntBASIC4.65□□□□□ -1.67
RORAP35398 RN7SKP199-201ENST00000410325 305 ntBASIC4.65□□□□□ -1.67
RORAP35398 RNU2-50P-201ENST00000410494 143 ntBASIC4.65□□□□□ -1.67
RORAP35398 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.65□□□□□ -1.67
RORAP35398 AC007738.1-201ENST00000413892 348 ntBASIC4.65□□□□□ -1.67
RORAP35398 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.65□□□□□ -1.67
RORAP35398 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.65□□□□□ -1.67
RORAP35398 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.65□□□□□ -1.67
RORAP35398 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.65□□□□□ -1.67
RORAP35398 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.65□□□□□ -1.67
RORAP35398 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RORAP35398 AL031584.1-201ENST00000447169 754 ntBASIC4.65□□□□□ -1.67
RORAP35398 AC073264.2-201ENST00000448886 166 ntBASIC4.65□□□□□ -1.67
RORAP35398 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.65□□□□□ -1.67
RORAP35398 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RORAP35398 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.65□□□□□ -1.67
RORAP35398 AL691482.1-201ENST00000453255 87 ntBASIC4.65□□□□□ -1.67
RORAP35398 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.65□□□□□ -1.67
RORAP35398 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.65□□□□□ -1.67
RORAP35398 AC093166.2-201ENST00000455969 1017 ntBASIC4.65□□□□□ -1.67
RORAP35398 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.65□□□□□ -1.67
RORAP35398 RN7SL738P-201ENST00000470264 297 ntBASIC4.65□□□□□ -1.67
RORAP35398 AC008897.1-201ENST00000494006 347 ntBASIC4.65□□□□□ -1.67
RORAP35398 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.65□□□□□ -1.67
RORAP35398 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.65□□□□□ -1.67
RORAP35398 AC092593.2-201ENST00000513866 913 ntBASIC4.65□□□□□ -1.67
RORAP35398 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.65□□□□□ -1.67
RORAP35398 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.65□□□□□ -1.67
RORAP35398 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.65□□□□□ -1.67
RORAP35398 HIGD1AP5-201ENST00000529959 259 ntBASIC4.65□□□□□ -1.67
RORAP35398 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.65□□□□□ -1.67
RORAP35398 AL133406.3-201ENST00000606817 541 ntBASIC4.65□□□□□ -1.67
RORAP35398 MIR6798-201ENST00000612887 67 ntBASIC4.65□□□□□ -1.67
RORAP35398 AL049794.2-201ENST00000616301 365 ntBASIC4.65□□□□□ -1.67
RORAP35398 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.65□□□□□ -1.67
RORAP35398 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.65□□□□□ -1.67
RORAP35398 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
RORAP35398 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RORAP35398 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RORAP35398 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
RORAP35398 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RORAP35398 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RORAP35398 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.65□□□□□ -1.67
RORAP35398 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RORAP35398 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RORAP35398 Z95327.2-201ENST00000414579 1873 ntBASIC4.64□□□□□ -1.67
RORAP35398 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.64□□□□□ -1.67
RORAP35398 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.64□□□□□ -1.67
RORAP35398 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RORAP35398 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.64□□□□□ -1.67
RORAP35398 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RORAP35398 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RORAP35398 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RORAP35398 RNU6-398P-201ENST00000384143 109 ntBASIC4.64□□□□□ -1.67
RORAP35398 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.64□□□□□ -1.67
RORAP35398 RPS4XP9-201ENST00000405151 780 ntBASIC4.64□□□□□ -1.67
RORAP35398 FAR2P2-201ENST00000413041 594 ntBASIC4.64□□□□□ -1.67
RORAP35398 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.64□□□□□ -1.67
RORAP35398 AC073136.2-201ENST00000417282 849 ntBASIC4.64□□□□□ -1.67
RORAP35398 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.64□□□□□ -1.67
RORAP35398 FAR2P4-202ENST00000425399 584 ntBASIC4.64□□□□□ -1.67
RORAP35398 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.67
RORAP35398 AC022022.1-201ENST00000430304 178 ntBASIC4.64□□□□□ -1.67
RORAP35398 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.64□□□□□ -1.67
RORAP35398 AL359265.2-201ENST00000434367 631 ntBASIC4.64□□□□□ -1.67
RORAP35398 FHP1-201ENST00000442741 703 ntBASIC4.64□□□□□ -1.67
RORAP35398 AC073587.1-201ENST00000447093 876 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms