Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 SETP1-201ENST00000556014 845 ntBASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 ATP5J2P6-201ENST00000565203 266 ntBASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 BTBD10P1-201ENST00000549824 1352 ntBASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 HSPD1P14-201ENST00000432666 1618 ntBASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRTM1Q9HBL6 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 MIPEPP2-201ENST00000422560 1819 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 EOGT-210ENST00000615922 1931 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 RNA5SP123-201ENST00000363244 119 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 MIR195-201ENST00000385194 87 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 SNORA79B-201ENST00000410557 148 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 VDAC1P9-201ENST00000412766 841 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 AL591848.1-201ENST00000413092 322 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 SEPT7P8-201ENST00000413308 775 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 COX6CP17-201ENST00000421389 185 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 RPL21P43-201ENST00000425440 472 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 OR2B7P-201ENST00000429302 934 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 AC002553.2-201ENST00000453217 340 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 PRELID3BP5-201ENST00000508612 460 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 BTF3P13-201ENST00000513224 490 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 RAB9BP1-201ENST00000519581 626 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 CYCSP28-201ENST00000534284 321 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 RPL21P7-201ENST00000557463 483 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 AC011487.3-201ENST00000593607 453 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 FAM25E-202ENST00000608562 189 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 AC091953.3-201ENST00000623220 236 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 AP001002.1-201ENST00000625148 1513 ntBASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRTM1Q9HBL6 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 CYB5AP4-201ENST00000396692 399 ntBASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 OR51B3P-201ENST00000412287 913 ntBASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 CEACAMP8-201ENST00000413902 580 ntBASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 ARL4AP3-201ENST00000441452 574 ntBASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 AL589765.3-201ENST00000446084 462 ntBASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 H2AFZP5-201ENST00000446960 382 ntBASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 DEFB109F-201ENST00000491870 277 ntBASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 AC008033.2-201ENST00000542626 177 ntBASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 AC009704.2-201ENST00000618739 483 ntBASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 AC006840.1-201ENST00000623069 542 ntBASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 INTS6P1-201ENST00000504674 2530 ntBASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRTM1Q9HBL6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms