Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 TCP1P3-201ENST00000414406 1498 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 RNA5SP90-201ENST00000364801 99 ntBASIC5.37□□□□□ -1.55
EBF3Q9H4W6 RNU6-650P-201ENST00000365658 111 ntBASIC5.37□□□□□ -1.55
EBF3Q9H4W6 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 RNA5SP241-201ENST00000391326 114 ntBASIC5.37□□□□□ -1.55
EBF3Q9H4W6 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AC005005.2-201ENST00000420779 380 ntBASIC5.37□□□□□ -1.55
EBF3Q9H4W6 NIPA2P1-201ENST00000426223 976 ntBASIC5.37□□□□□ -1.55
EBF3Q9H4W6 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AC079168.1-201ENST00000458741 345 ntBASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AC096992.1-201ENST00000459808 709 ntBASIC5.37□□□□□ -1.55
EBF3Q9H4W6 HMGN2P25-201ENST00000486956 268 ntBASIC5.37□□□□□ -1.55
EBF3Q9H4W6 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 RN7SL591P-201ENST00000496150 292 ntBASIC5.37□□□□□ -1.55
EBF3Q9H4W6 MTCO2P9-201ENST00000503214 694 ntBASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AC010468.3-201ENST00000508225 458 ntBASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 MIR4691-201ENST00000583764 85 ntBASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AC011487.3-201ENST00000593607 453 ntBASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AP001160.4-201ENST00000596971 382 ntBASIC5.37□□□□□ -1.55
EBF3Q9H4W6 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AC087385.3-201ENST00000620477 187 ntBASIC5.37□□□□□ -1.55
EBF3Q9H4W6 uc_338.7-201ENST00000621834 124 ntBASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AP002967.1-201ENST00000624203 539 ntBASIC5.37□□□□□ -1.55
EBF3Q9H4W6 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AC099654.6-201ENST00000636487 512 ntBASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 AC093591.2-201ENST00000565254 3843 ntBASIC5.37□□□□□ -1.55
EBF3Q9H4W6 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
EBF3Q9H4W6 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AL078599.1-201ENST00000402075 293 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 HNRNPDP2-201ENST00000406475 478 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 GNG5P5-201ENST00000420444 220 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 RHOT1P3-201ENST00000436571 331 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AL645931.1-201ENST00000439737 410 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AC092324.1-201ENST00000468671 324 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AP000797.2-201ENST00000475768 606 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 RPL23AP73-201ENST00000492507 471 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 MYL12BP2-201ENST00000503948 512 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 NAMPTP2-201ENST00000505629 1115 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AC093720.1-201ENST00000505681 714 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms