Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC138832.1-201ENST00000522871 556 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 AC040958.1-201ENST00000561102 201 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 RPL10P14-201ENST00000565265 298 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 AC079148.1-201ENST00000565944 819 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 MTCYBP13-201ENST00000578634 1093 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 MIR548Y-201ENST00000582739 110 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 MIR4512-201ENST00000583257 77 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 ZNF92P2-201ENST00000600543 1059 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 AC098483.2-201ENST00000603158 454 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 AL355816.1-201ENST00000607951 118 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 AC110792.4-201ENST00000609843 298 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 AC084824.5-201ENST00000612009 413 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 MIR1264-201ENST00000616374 69 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 AC020978.9-201ENST00000624380 1141 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 AC116563.2-201ENST00000624751 535 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 CR788268.1-201ENST00000603931 1809 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 AP000542.2-201ENST00000623199 6179 ntBASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 MAPK10-349ENST00000641767 3661 ntBASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 MIR105-1-201ENST00000385222 81 ntBASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 COX5BP7-201ENST00000414780 274 ntBASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 ARL2BPP3-201ENST00000421226 480 ntBASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 AL121882.1-201ENST00000422893 417 ntBASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 RPL19P16-201ENST00000433839 588 ntBASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 AC090018.1-201ENST00000434369 367 ntBASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 ELOCP3-201ENST00000439303 348 ntBASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 TPMTP4-201ENST00000450749 678 ntBASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 OR52E3P-201ENST00000452083 936 ntBASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 CBX1P5-201ENST00000475330 559 ntBASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 IGBP1P4-201ENST00000503202 879 ntBASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 RN7SL290P-201ENST00000578661 300 ntBASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 AC069307.1-201ENST00000602820 447 ntBASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 AP001273.1-201ENST00000624493 3152 ntBASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms