Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CKS2P33552 AP001486.2-201ENST00000561652 5113 ntBASIC3.34□□□□□ -1.87
CKS2P33552 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.34□□□□□ -1.87
CKS2P33552 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CKS2P33552 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CKS2P33552 RNA5SP132-201ENST00000364725 118 ntBASIC3.34□□□□□ -1.87
CKS2P33552 RNA5SP284-201ENST00000384547 118 ntBASIC3.34□□□□□ -1.87
CKS2P33552 HMGB3P7-201ENST00000400214 611 ntBASIC3.34□□□□□ -1.87
CKS2P33552 LYPLA1P3-201ENST00000402650 695 ntBASIC3.34□□□□□ -1.87
CKS2P33552 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.34□□□□□ -1.87
CKS2P33552 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CKS2P33552 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.34□□□□□ -1.87
CKS2P33552 EIF4A1P3-201ENST00000411521 244 ntBASIC3.34□□□□□ -1.87
CKS2P33552 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC3.34□□□□□ -1.87
CKS2P33552 RPS23P10-201ENST00000416185 486 ntBASIC3.34□□□□□ -1.87
CKS2P33552 ATG4AP1-201ENST00000416893 538 ntBASIC3.34□□□□□ -1.87
CKS2P33552 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.34□□□□□ -1.87
CKS2P33552 AC062016.2-201ENST00000420950 676 ntBASIC3.34□□□□□ -1.87
CKS2P33552 RPS3P2-201ENST00000421346 701 ntBASIC3.34□□□□□ -1.87
CKS2P33552 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC3.34□□□□□ -1.87
CKS2P33552 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.34□□□□□ -1.87
CKS2P33552 AC079807.1-201ENST00000429993 481 ntBASIC3.34□□□□□ -1.87
CKS2P33552 ELOCP18-201ENST00000434209 337 ntBASIC3.34□□□□□ -1.87
CKS2P33552 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.34□□□□□ -1.87
CKS2P33552 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.34□□□□□ -1.87
CKS2P33552 AL138899.2-201ENST00000439139 499 ntBASIC3.34□□□□□ -1.87
CKS2P33552 AL161636.2-201ENST00000445179 927 ntBASIC3.34□□□□□ -1.87
CKS2P33552 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.34□□□□□ -1.87
CKS2P33552 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC3.34□□□□□ -1.87
CKS2P33552 AC092905.1-201ENST00000467527 949 ntBASIC3.34□□□□□ -1.87
CKS2P33552 UBA52P3-201ENST00000491303 382 ntBASIC3.34□□□□□ -1.87
CKS2P33552 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC3.34□□□□□ -1.87
CKS2P33552 RPS6P4-201ENST00000494693 758 ntBASIC3.34□□□□□ -1.87
CKS2P33552 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.34□□□□□ -1.87
CKS2P33552 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC3.34□□□□□ -1.87
CKS2P33552 HNRNPKP5-201ENST00000515300 253 ntBASIC3.34□□□□□ -1.87
CKS2P33552 SNORD46.2-201ENST00000516021 102 ntBASIC3.34□□□□□ -1.87
CKS2P33552 RNA5SP228-201ENST00000516232 133 ntBASIC3.34□□□□□ -1.87
CKS2P33552 OR4A46P-201ENST00000527255 933 ntBASIC3.34□□□□□ -1.87
CKS2P33552 BMPR1APS2-201ENST00000527904 1012 ntBASIC3.34□□□□□ -1.87
CKS2P33552 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.34□□□□□ -1.87
CKS2P33552 AC022404.1-201ENST00000555320 273 ntBASIC3.34□□□□□ -1.87
CKS2P33552 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.34□□□□□ -1.87
CKS2P33552 AL139395.1-201ENST00000603662 160 ntBASIC3.34□□□□□ -1.87
CKS2P33552 AC104695.2-201ENST00000605056 775 ntBASIC3.34□□□□□ -1.87
CKS2P33552 AC108865.2-201ENST00000606881 432 ntBASIC3.34□□□□□ -1.87
CKS2P33552 AL159169.2-201ENST00000610061 1269 ntBASIC3.34□□□□□ -1.87
CKS2P33552 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.34□□□□□ -1.87
CKS2P33552 AC016542.2-201ENST00000624201 619 ntBASIC3.34□□□□□ -1.87
CKS2P33552 AC073593.1-201ENST00000624500 411 ntBASIC3.34□□□□□ -1.87
CKS2P33552 CR381572.2-201ENST00000624852 397 ntBASIC3.34□□□□□ -1.87
CKS2P33552 CASC19-222ENST00000641321 1173 ntBASIC3.34□□□□□ -1.87
CKS2P33552 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CKS2P33552 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CKS2P33552 AC112255.1-201ENST00000624070 2493 ntBASIC3.34□□□□□ -1.88
CKS2P33552 AC016588.2-201ENST00000632484 3021 ntBASIC3.34□□□□□ -1.88
CKS2P33552 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
CKS2P33552 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CKS2P33552 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.34□□□□□ -1.88
CKS2P33552 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CKS2P33552 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.34□□□□□ -1.88
CKS2P33552 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CKS2P33552 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CKS2P33552 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CKS2P33552 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.33□□□□□ -1.88
CKS2P33552 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CKS2P33552 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CKS2P33552 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CKS2P33552 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.33□□□□□ -1.88
CKS2P33552 RNA5SP510-201ENST00000364697 99 ntBASIC3.33□□□□□ -1.88
CKS2P33552 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CKS2P33552 RNU1-63P-201ENST00000383902 164 ntBASIC3.33□□□□□ -1.88
CKS2P33552 RNU1-82P-201ENST00000390851 165 ntBASIC3.33□□□□□ -1.88
CKS2P33552 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CKS2P33552 DUTP5-201ENST00000406790 469 ntBASIC3.33□□□□□ -1.88
CKS2P33552 AC114755.2-201ENST00000413520 361 ntBASIC3.33□□□□□ -1.88
CKS2P33552 GLUD1P9-201ENST00000420997 1173 ntBASIC3.33□□□□□ -1.88
CKS2P33552 DNAJA1P5-201ENST00000440278 943 ntBASIC3.33□□□□□ -1.88
CKS2P33552 RPL34P20-201ENST00000442771 351 ntBASIC3.33□□□□□ -1.88
CKS2P33552 AL163193.1-201ENST00000444895 788 ntBASIC3.33□□□□□ -1.88
CKS2P33552 SLC25A18P1-201ENST00000449385 454 ntBASIC3.33□□□□□ -1.88
CKS2P33552 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.33□□□□□ -1.88
CKS2P33552 VN1R32P-201ENST00000452234 905 ntBASIC3.33□□□□□ -1.88
CKS2P33552 AC234781.3-201ENST00000452540 973 ntBASIC3.33□□□□□ -1.88
CKS2P33552 AC092647.2-201ENST00000452998 253 ntBASIC3.33□□□□□ -1.88
CKS2P33552 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.33□□□□□ -1.88
CKS2P33552 RPL23AP56-201ENST00000460778 453 ntBASIC3.33□□□□□ -1.88
CKS2P33552 RN7SL466P-201ENST00000497546 295 ntBASIC3.33□□□□□ -1.88
CKS2P33552 PSMA2P2-201ENST00000504319 686 ntBASIC3.33□□□□□ -1.88
CKS2P33552 APOBEC3AP1-201ENST00000511396 287 ntBASIC3.33□□□□□ -1.88
CKS2P33552 NDUFB4P12-201ENST00000513465 390 ntBASIC3.33□□□□□ -1.88
CKS2P33552 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.33□□□□□ -1.88
CKS2P33552 RN7SKP5-201ENST00000517045 272 ntBASIC3.33□□□□□ -1.88
CKS2P33552 RN7SKP183-201ENST00000517169 324 ntBASIC3.33□□□□□ -1.88
CKS2P33552 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.33□□□□□ -1.88
CKS2P33552 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC3.33□□□□□ -1.88
CKS2P33552 OR10G5P-201ENST00000532733 358 ntBASIC3.33□□□□□ -1.88
CKS2P33552 UBTFL9-201ENST00000534504 1148 ntBASIC3.33□□□□□ -1.88
CKS2P33552 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC3.33□□□□□ -1.88
CKS2P33552 HMGB3P26-201ENST00000560051 582 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms