Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RNU6-1068P-201ENST00000410958 103 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC244452.1-201ENST00000413798 141 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AL606489.2-201ENST00000433886 234 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 TRAPPC2P8-201ENST00000440676 396 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC019084.1-201ENST00000457337 432 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC073594.1-201ENST00000462065 364 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 RPS27AP17-201ENST00000463344 455 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 RPL23P10-201ENST00000468780 412 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 RPL12P31-201ENST00000478433 450 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 RN7SL849P-201ENST00000485236 295 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC106800.2-201ENST00000514009 1103 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 SCARNA11.1-201ENST00000516918 132 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 IGLV1-62-201ENST00000518003 441 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 IGLVI-42-201ENST00000522485 381 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 RAB30-209ENST00000532548 644 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC093012.1-202ENST00000549403 582 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC124312.5-201ENST00000604451 268 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AL121809.2-201ENST00000613169 341 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AL356274.1-201ENST00000617064 410 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC090971.5-201ENST00000621102 293 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC025125.1-201ENST00000624743 1922 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC009220.2-201ENST00000489759 1751 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC009948.3-201ENST00000603415 1798 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 AC006511.3-201ENST00000624929 1783 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 BRAFP1-201ENST00000445336 2703 ntBASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDHB11Q9Y5F2 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 AC005294.1-201ENST00000355509 281 ntBASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 RNU6-289P-201ENST00000364093 107 ntBASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 AC245036.1-201ENST00000391727 309 ntBASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 AC068050.1-201ENST00000394891 380 ntBASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 RPL23AP32-201ENST00000395315 459 ntBASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 RN7SKP221-201ENST00000410420 301 ntBASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 BX679664.2-201ENST00000439282 283 ntBASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 AC079781.1-201ENST00000441505 394 ntBASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 HIGD1AP8-201ENST00000453927 274 ntBASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 AC093166.4-201ENST00000457867 318 ntBASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 RPSAP24-201ENST00000461543 873 ntBASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms