Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 COX6CP4-201ENST00000605798 228 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AC109309.2-201ENST00000612597 332 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 RNA5SP440-201ENST00000612665 119 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 MIR6071-201ENST00000616741 78 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AL590410.1-201ENST00000617925 333 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AC004808.2-201ENST00000627965 773 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AC008758.3-201ENST00000507003 1829 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AL445487.1-201ENST00000415694 1580 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 CUL4AP1-201ENST00000514750 1863 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AL929601.4-201ENST00000613011 1341 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AL672167.1-205ENST00000641112 3080 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 OR56A4-201ENST00000330728 1209 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 MIR921-201ENST00000401133 56 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 RN7SKP216-201ENST00000411050 312 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 GSTM3P2-201ENST00000412746 530 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC019070.1-201ENST00000415008 1024 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC073136.2-201ENST00000417282 849 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 MTND2P11-201ENST00000423638 648 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 OR7E125P-201ENST00000443450 846 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AP000281.1-201ENST00000444036 316 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC104651.2-201ENST00000447549 528 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 YWHAEP1-201ENST00000453697 763 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC009127.1-201ENST00000467090 155 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC098583.1-201ENST00000480875 255 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AL136038.1-201ENST00000497246 351 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 RNU6-709P-201ENST00000517257 104 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 KCTD9P6-201ENST00000522306 950 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC090281.1-201ENST00000523019 276 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 NMNAT1P1-201ENST00000554095 876 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AL731537.2-201ENST00000561565 951 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC010547.7-201ENST00000570323 333 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 TVP23CP2-201ENST00000571473 623 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 EIF1P5-201ENST00000585002 234 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC008638.3-201ENST00000603341 463 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC095055.1-201ENST00000603472 1113 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC005377.1-201ENST00000605126 456 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AL023583.1-201ENST00000607518 1143 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC104307.1-201ENST00000616142 196 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC005840.5-201ENST00000619166 599 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 RMST_9.1-201ENST00000619945 193 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC019206.1-201ENST00000621938 425 ntBASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC28BQ9BUN5 AC105074.1-201ENST00000623380 3095 ntBASIC4.71□□□□□ -1.65
CCDC28BQ9BUN5 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC28BQ9BUN5 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC28BQ9BUN5 CASC19-281ENST00000642118 1554 ntBASIC4.71□□□□□ -1.66
CCDC28BQ9BUN5 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC28BQ9BUN5 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC28BQ9BUN5 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC28BQ9BUN5 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC28BQ9BUN5 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC28BQ9BUN5 RNA5SP52-201ENST00000362448 134 ntBASIC4.71□□□□□ -1.66
CCDC28BQ9BUN5 RNA5SP183-201ENST00000362452 119 ntBASIC4.71□□□□□ -1.66
CCDC28BQ9BUN5 RHOT1P2-201ENST00000366423 333 ntBASIC4.71□□□□□ -1.66
CCDC28BQ9BUN5 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC28BQ9BUN5 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CCDC28BQ9BUN5 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC28BQ9BUN5 AL589994.1-201ENST00000404962 340 ntBASIC4.71□□□□□ -1.66
CCDC28BQ9BUN5 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms