Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFX4Q33E94 RNA5SP435-201ENST00000364044 108 ntBASIC4.44□□□□□ -1.7
RFX4Q33E94 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.44□□□□□ -1.7
RFX4Q33E94 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.44□□□□□ -1.7
RFX4Q33E94 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.44□□□□□ -1.7
RFX4Q33E94 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.44□□□□□ -1.7
RFX4Q33E94 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.44□□□□□ -1.7
RFX4Q33E94 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.44□□□□□ -1.7
RFX4Q33E94 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.44□□□□□ -1.7
RFX4Q33E94 HMGN2P25-201ENST00000486956 268 ntBASIC4.44□□□□□ -1.7
RFX4Q33E94 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
RFX4Q33E94 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.44□□□□□ -1.7
RFX4Q33E94 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.44□□□□□ -1.7
RFX4Q33E94 MYL12AP1-201ENST00000518490 515 ntBASIC4.44□□□□□ -1.7
RFX4Q33E94 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.44□□□□□ -1.7
RFX4Q33E94 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.44□□□□□ -1.7
RFX4Q33E94 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.44□□□□□ -1.7
RFX4Q33E94 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.44□□□□□ -1.7
RFX4Q33E94 AC027455.1-201ENST00000574104 594 ntBASIC4.44□□□□□ -1.7
RFX4Q33E94 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RFX4Q33E94 EIF1P5-201ENST00000585002 234 ntBASIC4.44□□□□□ -1.7
RFX4Q33E94 AC008759.1-201ENST00000589783 983 ntBASIC4.44□□□□□ -1.7
RFX4Q33E94 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.44□□□□□ -1.7
RFX4Q33E94 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.44□□□□□ -1.7
RFX4Q33E94 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.44□□□□□ -1.7
RFX4Q33E94 AC005377.1-201ENST00000605126 456 ntBASIC4.44□□□□□ -1.7
RFX4Q33E94 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.44□□□□□ -1.7
RFX4Q33E94 MIR7154-201ENST00000620673 73 ntBASIC4.44□□□□□ -1.7
RFX4Q33E94 AP002505.2-201ENST00000623585 696 ntBASIC4.44□□□□□ -1.7
RFX4Q33E94 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RFX4Q33E94 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.44□□□□□ -1.7
RFX4Q33E94 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.44□□□□□ -1.7
RFX4Q33E94 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFX4Q33E94 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RFX4Q33E94 NXF4-202ENST00000416098 1465 ntBASIC4.43□□□□□ -1.7
RFX4Q33E94 SMG1P6-201ENST00000532337 2930 ntBASIC4.43□□□□□ -1.7
RFX4Q33E94 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFX4Q33E94 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RFX4Q33E94 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RFX4Q33E94 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.43□□□□□ -1.7
RFX4Q33E94 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFX4Q33E94 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.43□□□□□ -1.7
RFX4Q33E94 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFX4Q33E94 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFX4Q33E94 RN7SKP206-201ENST00000410823 293 ntBASIC4.43□□□□□ -1.7
RFX4Q33E94 RN7SKP216-201ENST00000411050 312 ntBASIC4.43□□□□□ -1.7
RFX4Q33E94 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.43□□□□□ -1.7
RFX4Q33E94 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.43□□□□□ -1.7
RFX4Q33E94 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.43□□□□□ -1.7
RFX4Q33E94 DYNLL1P7-201ENST00000429273 258 ntBASIC4.43□□□□□ -1.7
RFX4Q33E94 AL389915.2-201ENST00000454576 441 ntBASIC4.43□□□□□ -1.7
RFX4Q33E94 HSPE1P22-201ENST00000456856 327 ntBASIC4.43□□□□□ -1.7
RFX4Q33E94 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.43□□□□□ -1.7
RFX4Q33E94 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.43□□□□□ -1.7
RFX4Q33E94 COX6B1P5-201ENST00000509843 249 ntBASIC4.43□□□□□ -1.7
RFX4Q33E94 AC106872.4-201ENST00000510050 523 ntBASIC4.43□□□□□ -1.7
RFX4Q33E94 RPL7L1P4-201ENST00000513004 707 ntBASIC4.43□□□□□ -1.7
RFX4Q33E94 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.43□□□□□ -1.7
RFX4Q33E94 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.43□□□□□ -1.7
RFX4Q33E94 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RFX4Q33E94 OR7E128P-201ENST00000532736 1024 ntBASIC4.43□□□□□ -1.7
RFX4Q33E94 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.43□□□□□ -1.7
RFX4Q33E94 MTND6P33-201ENST00000571794 183 ntBASIC4.43□□□□□ -1.7
RFX4Q33E94 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.43□□□□□ -1.7
RFX4Q33E94 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.43□□□□□ -1.7
RFX4Q33E94 AC008115.4-201ENST00000619780 775 ntBASIC4.43□□□□□ -1.7
RFX4Q33E94 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.43□□□□□ -1.7
RFX4Q33E94 AL359757.1-201ENST00000623176 255 ntBASIC4.43□□□□□ -1.7
RFX4Q33E94 AP003499.2-201ENST00000624100 483 ntBASIC4.43□□□□□ -1.7
RFX4Q33E94 MIR4302-201ENST00000638058 60 ntBASIC4.43□□□□□ -1.7
RFX4Q33E94 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.43□□□□□ -1.7
RFX4Q33E94 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RFX4Q33E94 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
RFX4Q33E94 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RFX4Q33E94 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFX4Q33E94 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFX4Q33E94 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFX4Q33E94 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFX4Q33E94 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFX4Q33E94 OR14L1P-202ENST00000641545 3009 ntBASIC4.42□□□□□ -1.7
RFX4Q33E94 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFX4Q33E94 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RFX4Q33E94 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFX4Q33E94 RN7SKP224-201ENST00000364140 325 ntBASIC4.42□□□□□ -1.7
RFX4Q33E94 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFX4Q33E94 LAP3P1-201ENST00000403648 294 ntBASIC4.42□□□□□ -1.7
RFX4Q33E94 ARL4AP5-201ENST00000404372 599 ntBASIC4.42□□□□□ -1.7
RFX4Q33E94 MIR1286-201ENST00000408112 78 ntBASIC4.42□□□□□ -1.7
RFX4Q33E94 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.42□□□□□ -1.7
RFX4Q33E94 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.42□□□□□ -1.7
RFX4Q33E94 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.42□□□□□ -1.7
RFX4Q33E94 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFX4Q33E94 AC245047.2-201ENST00000441060 530 ntBASIC4.42□□□□□ -1.7
RFX4Q33E94 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.42□□□□□ -1.7
RFX4Q33E94 AC000111.2-201ENST00000448200 210 ntBASIC4.42□□□□□ -1.7
RFX4Q33E94 AL606490.1-201ENST00000452266 765 ntBASIC4.42□□□□□ -1.7
RFX4Q33E94 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.42□□□□□ -1.7
RFX4Q33E94 AC113430.1-201ENST00000506872 718 ntBASIC4.42□□□□□ -1.7
RFX4Q33E94 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.42□□□□□ -1.7
RFX4Q33E94 ATP5LP3-201ENST00000514223 304 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms