Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC133644.2-201ENST00000608142 540 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 AL627230.1-201ENST00000613077 211 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 EIF3FP1-201ENST00000613970 806 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 AL591926.8-201ENST00000616876 211 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 AC079298.2-201ENST00000623885 459 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.24□□□□□ -1.57
PDGFRAP16234 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PDGFRAP16234 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFRAP16234 AC008079.2-201ENST00000623543 20396 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFRAP16234 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.24□□□□□ -1.57
PDGFRAP16234 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFRAP16234 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.24□□□□□ -1.57
PDGFRAP16234 AC100778.3-201ENST00000580060 1750 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
PDGFRAP16234 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFRAP16234 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PDGFRAP16234 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PDGFRAP16234 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.23□□□□□ -1.57
PDGFRAP16234 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.23□□□□□ -1.57
PDGFRAP16234 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFRAP16234 RN7SKP224-201ENST00000364140 325 ntBASIC5.23□□□□□ -1.57
PDGFRAP16234 CHMP1B2P-201ENST00000399581 597 ntBASIC5.23□□□□□ -1.57
PDGFRAP16234 OR1F12-201ENST00000402365 945 ntBASIC5.23□□□□□ -1.57
PDGFRAP16234 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFRAP16234 AL590806.1-201ENST00000415818 853 ntBASIC5.23□□□□□ -1.57
PDGFRAP16234 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFRAP16234 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.23□□□□□ -1.57
PDGFRAP16234 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFRAP16234 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFRAP16234 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFRAP16234 RHOT1P3-201ENST00000436571 331 ntBASIC5.23□□□□□ -1.57
PDGFRAP16234 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.23□□□□□ -1.57
PDGFRAP16234 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFRAP16234 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFRAP16234 AC090543.1-201ENST00000492168 485 ntBASIC5.23□□□□□ -1.57
PDGFRAP16234 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFRAP16234 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFRAP16234 RNA5SP43-201ENST00000516559 110 ntBASIC5.23□□□□□ -1.57
PDGFRAP16234 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFRAP16234 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFRAP16234 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFRAP16234 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFRAP16234 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFRAP16234 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFRAP16234 AC068993.1-201ENST00000546724 589 ntBASIC5.23□□□□□ -1.57
PDGFRAP16234 AGGF1P9-201ENST00000561884 913 ntBASIC5.23□□□□□ -1.57
PDGFRAP16234 MIR4646-201ENST00000580775 63 ntBASIC5.23□□□□□ -1.57
PDGFRAP16234 MIR4691-201ENST00000583764 85 ntBASIC5.23□□□□□ -1.57
PDGFRAP16234 EIF1P5-201ENST00000585002 234 ntBASIC5.23□□□□□ -1.57
PDGFRAP16234 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.23□□□□□ -1.57
PDGFRAP16234 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.23□□□□□ -1.57
PDGFRAP16234 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.23□□□□□ -1.57
PDGFRAP16234 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFRAP16234 AC131971.1-201ENST00000332881 1482 ntBASIC5.23□□□□□ -1.57
PDGFRAP16234 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFRAP16234 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PDGFRAP16234 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PDGFRAP16234 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
PDGFRAP16234 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFRAP16234 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PDGFRAP16234 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFRAP16234 AC068446.1-201ENST00000556425 1549 ntBASIC5.23□□□□□ -1.57
PDGFRAP16234 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFRAP16234 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
PDGFRAP16234 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.22□□□□□ -1.57
PDGFRAP16234 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDGFRAP16234 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PDGFRAP16234 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PDGFRAP16234 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.22□□□□□ -1.57
PDGFRAP16234 QRSL1P2-201ENST00000418582 964 ntBASIC5.22□□□□□ -1.57
PDGFRAP16234 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.22□□□□□ -1.57
PDGFRAP16234 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.22□□□□□ -1.57
PDGFRAP16234 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.22□□□□□ -1.57
PDGFRAP16234 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
PDGFRAP16234 AL353898.1-201ENST00000444055 238 ntBASIC5.22□□□□□ -1.57
PDGFRAP16234 MTND5P8-201ENST00000449817 1083 ntBASIC5.22□□□□□ -1.57
PDGFRAP16234 AC022431.1-201ENST00000450941 438 ntBASIC5.22□□□□□ -1.57
PDGFRAP16234 RPS17P2-201ENST00000461663 408 ntBASIC5.22□□□□□ -1.57
PDGFRAP16234 COX6B1P2-201ENST00000489624 230 ntBASIC5.22□□□□□ -1.57
PDGFRAP16234 RPL37AP8-201ENST00000494116 276 ntBASIC5.22□□□□□ -1.57
PDGFRAP16234 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.22□□□□□ -1.57
PDGFRAP16234 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.22□□□□□ -1.57
PDGFRAP16234 AC093770.1-201ENST00000511559 571 ntBASIC5.22□□□□□ -1.57
PDGFRAP16234 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.22□□□□□ -1.57
PDGFRAP16234 AC107918.3-201ENST00000533272 382 ntBASIC5.22□□□□□ -1.57
PDGFRAP16234 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.22□□□□□ -1.57
PDGFRAP16234 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.22□□□□□ -1.57
PDGFRAP16234 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PDGFRAP16234 AL731537.2-201ENST00000561565 951 ntBASIC5.22□□□□□ -1.57
PDGFRAP16234 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.22□□□□□ -1.57
PDGFRAP16234 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.22□□□□□ -1.57
PDGFRAP16234 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.22□□□□□ -1.57
PDGFRAP16234 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.22□□□□□ -1.57
PDGFRAP16234 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.22□□□□□ -1.57
PDGFRAP16234 MIR6730-201ENST00000622213 67 ntBASIC5.22□□□□□ -1.57
PDGFRAP16234 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.22□□□□□ -1.57
PDGFRAP16234 AC073869.10-201ENST00000642016 354 ntBASIC5.22□□□□□ -1.57
PDGFRAP16234 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDGFRAP16234 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms