Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MTCYBP32-201ENST00000427945 1084 ntBASIC5.16□□□□□ -1.58
PCNAP12004 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.16□□□□□ -1.58
PCNAP12004 MTCYBP12-201ENST00000440559 1134 ntBASIC5.16□□□□□ -1.58
PCNAP12004 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.16□□□□□ -1.58
PCNAP12004 HMGB1P26-201ENST00000452520 628 ntBASIC5.16□□□□□ -1.58
PCNAP12004 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCNAP12004 RPL35AP19-201ENST00000469425 329 ntBASIC5.16□□□□□ -1.58
PCNAP12004 AC100832.1-201ENST00000471945 383 ntBASIC5.16□□□□□ -1.58
PCNAP12004 PRELID3BP6-201ENST00000503839 571 ntBASIC5.16□□□□□ -1.58
PCNAP12004 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.16□□□□□ -1.58
PCNAP12004 AC069306.1-201ENST00000507006 843 ntBASIC5.16□□□□□ -1.58
PCNAP12004 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCNAP12004 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.16□□□□□ -1.58
PCNAP12004 SNORA31.13-201ENST00000516624 135 ntBASIC5.16□□□□□ -1.58
PCNAP12004 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCNAP12004 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.16□□□□□ -1.58
PCNAP12004 AC127381.1-201ENST00000555979 939 ntBASIC5.16□□□□□ -1.58
PCNAP12004 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.16□□□□□ -1.58
PCNAP12004 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCNAP12004 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.16□□□□□ -1.58
PCNAP12004 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.16□□□□□ -1.58
PCNAP12004 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.16□□□□□ -1.58
PCNAP12004 AC245100.7-201ENST00000609678 442 ntBASIC5.16□□□□□ -1.58
PCNAP12004 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.16□□□□□ -1.58
PCNAP12004 RNA5SP440-201ENST00000612665 119 ntBASIC5.16□□□□□ -1.58
PCNAP12004 AL359513.1-201ENST00000614364 557 ntBASIC5.16□□□□□ -1.58
PCNAP12004 AP004607.9-201ENST00000618202 316 ntBASIC5.16□□□□□ -1.58
PCNAP12004 AC084824.4-201ENST00000620106 731 ntBASIC5.16□□□□□ -1.58
PCNAP12004 AC026124.2-201ENST00000621847 656 ntBASIC5.16□□□□□ -1.58
PCNAP12004 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.16□□□□□ -1.58
PCNAP12004 AC073342.3-201ENST00000624211 193 ntBASIC5.16□□□□□ -1.58
PCNAP12004 AC126544.2-201ENST00000625174 749 ntBASIC5.16□□□□□ -1.58
PCNAP12004 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PCNAP12004 AC083843.3-201ENST00000623679 2186 ntBASIC5.16□□□□□ -1.58
PCNAP12004 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PCNAP12004 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCNAP12004 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCNAP12004 SPATA2P1-201ENST00000431223 2055 ntBASIC5.16□□□□□ -1.58
PCNAP12004 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCNAP12004 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
PCNAP12004 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCNAP12004 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PCNAP12004 AC025574.1-201ENST00000554784 1653 ntBASIC5.15□□□□□ -1.58
PCNAP12004 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
PCNAP12004 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCNAP12004 SMG1P4-204ENST00000523028 4131 ntBASIC5.15□□□□□ -1.58
PCNAP12004 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCNAP12004 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
PCNAP12004 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCNAP12004 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
PCNAP12004 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCNAP12004 THAP12P5-201ENST00000405864 2275 ntBASIC5.15□□□□□ -1.58
PCNAP12004 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PCNAP12004 MIR133B-201ENST00000362210 119 ntBASIC5.15□□□□□ -1.59
PCNAP12004 OR1L6-202ENST00000373684 1044 ntBASIC5.15□□□□□ -1.59
PCNAP12004 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCNAP12004 RNU1-77P-201ENST00000390868 162 ntBASIC5.15□□□□□ -1.59
PCNAP12004 SNORA17A-201ENST00000391185 133 ntBASIC5.15□□□□□ -1.59
PCNAP12004 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.15□□□□□ -1.59
PCNAP12004 CHMP1B2P-201ENST00000399581 597 ntBASIC5.15□□□□□ -1.59
PCNAP12004 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.15□□□□□ -1.59
PCNAP12004 RPL7AP49-201ENST00000429522 581 ntBASIC5.15□□□□□ -1.59
PCNAP12004 AL591438.1-201ENST00000433508 581 ntBASIC5.15□□□□□ -1.59
PCNAP12004 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.15□□□□□ -1.59
PCNAP12004 MED6P1-201ENST00000439659 713 ntBASIC5.15□□□□□ -1.59
PCNAP12004 AL606517.1-201ENST00000446914 387 ntBASIC5.15□□□□□ -1.59
PCNAP12004 AC144530.1-201ENST00000452862 555 ntBASIC5.15□□□□□ -1.59
PCNAP12004 AP000797.2-201ENST00000475768 606 ntBASIC5.15□□□□□ -1.59
PCNAP12004 RN7SL809P-201ENST00000482040 297 ntBASIC5.15□□□□□ -1.59
PCNAP12004 RPL21P47-201ENST00000483696 477 ntBASIC5.15□□□□□ -1.59
PCNAP12004 HMGB1P38-201ENST00000490557 577 ntBASIC5.15□□□□□ -1.59
PCNAP12004 AC022133.1-201ENST00000490961 571 ntBASIC5.15□□□□□ -1.59
PCNAP12004 RN7SL466P-201ENST00000497546 295 ntBASIC5.15□□□□□ -1.59
PCNAP12004 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.15□□□□□ -1.59
PCNAP12004 GTF2IP9-201ENST00000502460 301 ntBASIC5.15□□□□□ -1.59
PCNAP12004 AC010460.2-201ENST00000509054 677 ntBASIC5.15□□□□□ -1.59
PCNAP12004 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.15□□□□□ -1.59
PCNAP12004 AC010476.1-201ENST00000519111 851 ntBASIC5.15□□□□□ -1.59
PCNAP12004 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.15□□□□□ -1.59
PCNAP12004 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PCNAP12004 BLZF2P-201ENST00000553776 1130 ntBASIC5.15□□□□□ -1.59
PCNAP12004 AL121594.4-201ENST00000556211 1196 ntBASIC5.15□□□□□ -1.59
PCNAP12004 AC106734.1-201ENST00000568646 663 ntBASIC5.15□□□□□ -1.59
PCNAP12004 RBM22P1-201ENST00000578589 1214 ntBASIC5.15□□□□□ -1.59
PCNAP12004 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.15□□□□□ -1.59
PCNAP12004 AC010245.2-201ENST00000606908 1167 ntBASIC5.15□□□□□ -1.59
PCNAP12004 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.15□□□□□ -1.59
PCNAP12004 VN1R9P-201ENST00000614184 867 ntBASIC5.15□□□□□ -1.59
PCNAP12004 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCNAP12004 AL512427.1-201ENST00000618593 349 ntBASIC5.15□□□□□ -1.59
PCNAP12004 MIR8080-201ENST00000622224 89 ntBASIC5.15□□□□□ -1.59
PCNAP12004 AC091932.2-201ENST00000623014 291 ntBASIC5.15□□□□□ -1.59
PCNAP12004 AP003400.3-201ENST00000624904 346 ntBASIC5.15□□□□□ -1.59
PCNAP12004 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.15□□□□□ -1.59
PCNAP12004 SNORA17.5-201ENST00000630429 132 ntBASIC5.15□□□□□ -1.59
PCNAP12004 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PCNAP12004 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
PCNAP12004 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PCNAP12004 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.15□□□□□ -1.59
PCNAP12004 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms