Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RFPL4AP5-201ENST00000514977 504 ntBASIC5.39□□□□□ -1.55
VCPP55072 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.39□□□□□ -1.55
VCPP55072 RN7SKP122-201ENST00000515923 296 ntBASIC5.39□□□□□ -1.55
VCPP55072 AC012400.1-201ENST00000518452 381 ntBASIC5.39□□□□□ -1.55
VCPP55072 HMGB1P23-201ENST00000518743 568 ntBASIC5.39□□□□□ -1.55
VCPP55072 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.39□□□□□ -1.55
VCPP55072 AC084759.1-201ENST00000561168 290 ntBASIC5.39□□□□□ -1.55
VCPP55072 BGLT3-201ENST00000564523 994 ntBASIC5.39□□□□□ -1.55
VCPP55072 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.39□□□□□ -1.55
VCPP55072 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VCPP55072 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.39□□□□□ -1.55
VCPP55072 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.39□□□□□ -1.55
VCPP55072 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.39□□□□□ -1.55
VCPP55072 AL121890.2-201ENST00000617644 465 ntBASIC5.39□□□□□ -1.55
VCPP55072 AL161637.1-201ENST00000622380 412 ntBASIC5.39□□□□□ -1.55
VCPP55072 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.39□□□□□ -1.55
VCPP55072 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.39□□□□□ -1.55
VCPP55072 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.39□□□□□ -1.55
VCPP55072 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.39□□□□□ -1.55
VCPP55072 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VCPP55072 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.39□□□□□ -1.55
VCPP55072 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VCPP55072 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.39□□□□□ -1.55
VCPP55072 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
VCPP55072 STX3-208ENST00000641815 3236 ntBASIC5.38□□□□□ -1.55
VCPP55072 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VCPP55072 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VCPP55072 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VCPP55072 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VCPP55072 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
VCPP55072 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
VCPP55072 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.38□□□□□ -1.55
VCPP55072 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VCPP55072 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VCPP55072 RNU6-1331P-201ENST00000363658 106 ntBASIC5.38□□□□□ -1.55
VCPP55072 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VCPP55072 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VCPP55072 RNU6-729P-201ENST00000384399 107 ntBASIC5.38□□□□□ -1.55
VCPP55072 CTSL3P-202ENST00000412179 788 ntBASIC5.38□□□□□ -1.55
VCPP55072 SEPT7P8-201ENST00000413308 775 ntBASIC5.38□□□□□ -1.55
VCPP55072 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.38□□□□□ -1.55
VCPP55072 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.38□□□□□ -1.55
VCPP55072 AC009238.2-201ENST00000431026 355 ntBASIC5.38□□□□□ -1.55
VCPP55072 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.38□□□□□ -1.55
VCPP55072 RPL36AP15-201ENST00000444514 266 ntBASIC5.38□□□□□ -1.55
VCPP55072 CDC27P1-201ENST00000445384 715 ntBASIC5.38□□□□□ -1.55
VCPP55072 AC044797.1-201ENST00000445744 679 ntBASIC5.38□□□□□ -1.55
VCPP55072 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.38□□□□□ -1.55
VCPP55072 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.38□□□□□ -1.55
VCPP55072 AC107015.1-201ENST00000466902 747 ntBASIC5.38□□□□□ -1.55
VCPP55072 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.38□□□□□ -1.55
VCPP55072 HMGN2P25-201ENST00000486956 268 ntBASIC5.38□□□□□ -1.55
VCPP55072 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.38□□□□□ -1.55
VCPP55072 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.38□□□□□ -1.55
VCPP55072 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.38□□□□□ -1.55
VCPP55072 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.38□□□□□ -1.55
VCPP55072 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.38□□□□□ -1.55
VCPP55072 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.38□□□□□ -1.55
VCPP55072 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.38□□□□□ -1.55
VCPP55072 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.38□□□□□ -1.55
VCPP55072 AC091042.1-201ENST00000579213 173 ntBASIC5.38□□□□□ -1.55
VCPP55072 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.38□□□□□ -1.55
VCPP55072 CCDC58P3-201ENST00000590792 430 ntBASIC5.38□□□□□ -1.55
VCPP55072 AC019193.2-201ENST00000610012 634 ntBASIC5.38□□□□□ -1.55
VCPP55072 AC108359.1-201ENST00000616451 1211 ntBASIC5.38□□□□□ -1.55
VCPP55072 MIR6830-201ENST00000636015 70 ntBASIC5.38□□□□□ -1.55
VCPP55072 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.38□□□□□ -1.55
VCPP55072 TMEM30CP-203ENST00000637814 1035 ntBASIC5.38□□□□□ -1.55
VCPP55072 AC104260.2-201ENST00000623551 3497 ntBASIC5.38□□□□□ -1.55
VCPP55072 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VCPP55072 AC007996.1-201ENST00000620414 2821 ntBASIC5.38□□□□□ -1.55
VCPP55072 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.37□□□□□ -1.55
VCPP55072 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.37□□□□□ -1.55
VCPP55072 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VCPP55072 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VCPP55072 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.37□□□□□ -1.55
VCPP55072 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VCPP55072 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VCPP55072 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VCPP55072 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.37□□□□□ -1.55
VCPP55072 RNA5SP90-201ENST00000364801 99 ntBASIC5.37□□□□□ -1.55
VCPP55072 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.37□□□□□ -1.55
VCPP55072 AL390316.1-201ENST00000406279 553 ntBASIC5.37□□□□□ -1.55
VCPP55072 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.37□□□□□ -1.55
VCPP55072 AL691447.1-201ENST00000419456 387 ntBASIC5.37□□□□□ -1.55
VCPP55072 CHIAP3-201ENST00000423668 1133 ntBASIC5.37□□□□□ -1.55
VCPP55072 RPS4XP16-201ENST00000427198 791 ntBASIC5.37□□□□□ -1.55
VCPP55072 RPS29P10-201ENST00000439197 166 ntBASIC5.37□□□□□ -1.55
VCPP55072 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.37□□□□□ -1.55
VCPP55072 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.37□□□□□ -1.55
VCPP55072 AC112498.1-201ENST00000444401 332 ntBASIC5.37□□□□□ -1.55
VCPP55072 AC140172.1-201ENST00000502928 141 ntBASIC5.37□□□□□ -1.55
VCPP55072 AC111000.3-201ENST00000508057 576 ntBASIC5.37□□□□□ -1.55
VCPP55072 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
VCPP55072 AC018442.3-201ENST00000523025 183 ntBASIC5.37□□□□□ -1.55
VCPP55072 AC025423.2-201ENST00000537570 439 ntBASIC5.37□□□□□ -1.55
VCPP55072 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.37□□□□□ -1.55
VCPP55072 AC018695.5-201ENST00000605872 315 ntBASIC5.37□□□□□ -1.55
VCPP55072 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.37□□□□□ -1.55
VCPP55072 AC010857.1-201ENST00000606398 594 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms