Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 VN2R3P-201ENST00000422626 1412 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 RNU5B-1-201ENST00000363286 116 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 MIR105-1-201ENST00000385222 81 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 MIR320B1-201ENST00000390209 79 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 HSPA8P15-201ENST00000401676 786 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 TPT1P1-201ENST00000458495 518 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 AC009127.1-201ENST00000467090 155 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 AC090114.3-201ENST00000479267 829 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 RPS27AP16-201ENST00000492222 470 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 AC026414.1-201ENST00000504046 698 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 RPS4XP20-201ENST00000505751 772 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 AC093815.1-201ENST00000508637 280 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 AC108043.1-201ENST00000512696 574 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 EIF3KP3-201ENST00000514461 639 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 RNU6-276P-201ENST00000516114 96 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 RNA5SP228-201ENST00000516232 133 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 RN7SKP147-201ENST00000517154 244 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 AP001207.2-201ENST00000519490 539 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 OR5AK3P-201ENST00000527486 1297 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 OR5AM1P-201ENST00000532136 1032 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 AC090527.3-201ENST00000619041 548 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 AC145207.9-201ENST00000623802 325 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 AC068787.1-201ENST00000623908 691 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 METTL21EP-201ENST00000298105 713 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 RNU1-136P-201ENST00000384181 164 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AC233289.1-201ENST00000403700 508 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 ZNF602P-201ENST00000405929 924 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AC105402.1-201ENST00000413336 545 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 CYCSP11-201ENST00000436426 315 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AL390879.1-201ENST00000439143 386 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 GAPDHP25-201ENST00000447061 1001 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 HIGD1AP8-201ENST00000453927 274 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 snoU13.20-201ENST00000459180 104 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AC109464.1-201ENST00000511091 819 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AC092593.2-201ENST00000513866 913 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 HIGD1AP5-201ENST00000529959 259 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 NPM1P35-201ENST00000533043 868 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AC008083.2-201ENST00000546707 476 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AC013244.3-201ENST00000605614 388 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AL031658.2-201ENST00000616850 651 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AC073569.3-201ENST00000619055 682 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AC007342.8-201ENST00000623278 678 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 AL353662.3-201ENST00000625131 237 ntBASIC5.42□□□□□ -1.54
HMGB4Q8WW32 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms