Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC7.12□□□□□ -1.27
VPS8Q8N3P4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VPS8Q8N3P4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC7.12□□□□□ -1.27
VPS8Q8N3P4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
VPS8Q8N3P4 AC097461.1-201ENST00000568928 2821 ntBASIC7.12□□□□□ -1.27
VPS8Q8N3P4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
VPS8Q8N3P4 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
VPS8Q8N3P4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
VPS8Q8N3P4 U3.22-201ENST00000391120 215 ntBASIC7.11□□□□□ -1.27
VPS8Q8N3P4 AL139095.3-201ENST00000419672 1203 ntBASIC7.11□□□□□ -1.27
VPS8Q8N3P4 AL356387.2-201ENST00000422272 243 ntBASIC7.11□□□□□ -1.27
VPS8Q8N3P4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC7.11□□□□□ -1.27
VPS8Q8N3P4 AC023141.6-201ENST00000429418 337 ntBASIC7.11□□□□□ -1.27
VPS8Q8N3P4 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.11□□□□□ -1.27
VPS8Q8N3P4 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC7.11□□□□□ -1.27
VPS8Q8N3P4 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
VPS8Q8N3P4 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC7.11□□□□□ -1.27
VPS8Q8N3P4 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
VPS8Q8N3P4 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC7.11□□□□□ -1.27
VPS8Q8N3P4 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC7.11□□□□□ -1.27
VPS8Q8N3P4 AL356218.2-201ENST00000605264 187 ntBASIC7.11□□□□□ -1.27
VPS8Q8N3P4 AL023583.1-201ENST00000607518 1143 ntBASIC7.11□□□□□ -1.27
VPS8Q8N3P4 AP002360.3-201ENST00000607673 710 ntBASIC7.11□□□□□ -1.27
VPS8Q8N3P4 AC234782.5-201ENST00000617723 324 ntBASIC7.11□□□□□ -1.27
VPS8Q8N3P4 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
VPS8Q8N3P4 AC108751.5-201ENST00000492880 1336 ntBASIC7.11□□□□□ -1.27
VPS8Q8N3P4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
VPS8Q8N3P4 CCT8P1-201ENST00000413611 1657 ntBASIC7.11□□□□□ -1.27
VPS8Q8N3P4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC7.11□□□□□ -1.27
VPS8Q8N3P4 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
VPS8Q8N3P4 AC068538.1-201ENST00000376856 336 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 SNORA74C-2-201ENST00000411179 201 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 RPL12P28-201ENST00000430852 489 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 FHP1-201ENST00000442741 703 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 CYCSP34-201ENST00000458172 304 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 AC053481.1-201ENST00000467217 306 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 RPS4XP18-201ENST00000495480 763 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 AC015795.1-201ENST00000513669 327 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 SNORA70.11-201ENST00000515987 138 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 SNORA70.13-201ENST00000516116 138 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 AC021483.2-201ENST00000567415 758 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 MIR4697-201ENST00000582977 78 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 AC090948.1-201ENST00000607464 549 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 AC015871.5-202ENST00000623252 701 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 AC010435.1-201ENST00000623353 1177 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 AC139769.1-204ENST00000472297 1931 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 AC083837.1-201ENST00000565297 2994 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 RN7SKP167-201ENST00000411047 285 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 AC004690.1-201ENST00000418216 328 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 RPL23AP37-201ENST00000479658 549 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 OR8A2P-201ENST00000528631 952 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 TRAV8-5-201ENST00000537369 341 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 MEG8-217ENST00000556637 924 ntTSL 5 BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 MIR4277-201ENST00000578298 84 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 RPL26P30-202ENST00000602923 645 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC7.1□□□□□ -1.27
VPS8Q8N3P4 AC083809.1-201ENST00000615051 472 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC7.1□□□□□ -1.27
VPS8Q8N3P4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
VPS8Q8N3P4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
VPS8Q8N3P4 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
VPS8Q8N3P4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
VPS8Q8N3P4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC7.09□□□□□ -1.27
VPS8Q8N3P4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
VPS8Q8N3P4 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.09□□□□□ -1.27
VPS8Q8N3P4 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
VPS8Q8N3P4 OR56B2P-201ENST00000317102 954 ntBASIC7.09□□□□□ -1.28
VPS8Q8N3P4 RNA5SP509-201ENST00000364577 119 ntBASIC7.09□□□□□ -1.28
VPS8Q8N3P4 NPM1P26-201ENST00000426339 738 ntBASIC7.09□□□□□ -1.28
VPS8Q8N3P4 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC7.09□□□□□ -1.28
VPS8Q8N3P4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
VPS8Q8N3P4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
VPS8Q8N3P4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
VPS8Q8N3P4 CR383656.1-201ENST00000484916 377 ntBASIC7.09□□□□□ -1.28
VPS8Q8N3P4 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC7.09□□□□□ -1.28
VPS8Q8N3P4 AC138938.1-201ENST00000515431 782 ntBASIC7.09□□□□□ -1.28
VPS8Q8N3P4 AP002981.1-201ENST00000517692 975 ntBASIC7.09□□□□□ -1.28
VPS8Q8N3P4 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC7.09□□□□□ -1.28
VPS8Q8N3P4 AC009643.1-201ENST00000532030 391 ntBASIC7.09□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms