Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC017079.1-201ENST00000333650 415 ntBASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 AL390316.1-201ENST00000406279 553 ntBASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 U3.32-201ENST00000408116 212 ntBASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 RN7SKP100-201ENST00000411258 284 ntBASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC009480.2-201ENST00000422916 432 ntBASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 EIF2S2P3-201ENST00000428356 999 ntBASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 RPSAP41-201ENST00000439695 860 ntBASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 RN7SL441P-201ENST00000492388 296 ntBASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 BNIP3P35-201ENST00000604530 490 ntBASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 OR51C1P-202ENST00000641159 1444 ntBASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.79□□□□□ -1.64
TMX2-CTNND1H3BSU7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 XKRY2-202ENST00000623874 1581 ntBASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 XKRY-202ENST00000624960 1581 ntBASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 Z95327.2-201ENST00000414579 1873 ntBASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC114755.2-201ENST00000413520 361 ntBASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 BX510359.2-201ENST00000417920 305 ntBASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 AL358176.3-201ENST00000420757 454 ntBASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 C4BPAP2-201ENST00000428434 478 ntBASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 NRBF2P3-201ENST00000432731 865 ntBASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 TCEA1P1-201ENST00000449716 880 ntBASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 FTH1P2-201ENST00000466086 412 ntBASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 RN7SL385P-201ENST00000468873 276 ntBASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 RPL5P22-201ENST00000480199 884 ntBASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 RPL23AP72-201ENST00000492447 435 ntBASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 NDUFB4P11-201ENST00000560510 395 ntBASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 EIF1P5-201ENST00000585002 234 ntBASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 AL137246.1-201ENST00000607072 977 ntBASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 AP005432.2-201ENST00000608162 586 ntBASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 SAMMSON-226ENST00000642089 1582 ntBASIC4.78□□□□□ -1.64
TMX2-CTNND1H3BSU7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
TMX2-CTNND1H3BSU7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.65
TMX2-CTNND1H3BSU7 CASC19-204ENST00000641001 2055 ntBASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC007738.1-201ENST00000413892 348 ntBASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 PCNPP4-201ENST00000414817 517 ntBASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 OR6C64P-201ENST00000419708 825 ntBASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 RPL35AP21-201ENST00000437667 333 ntBASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 NPM1P33-201ENST00000438918 872 ntBASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 RPS29P9-201ENST00000440360 171 ntBASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 TXNP2-201ENST00000443918 295 ntBASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AURKAPS2-201ENST00000454983 333 ntBASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms