Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC096775.1-201ENST00000437724 448 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS50Q96JG6 AC023512.1-201ENST00000444513 499 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.49□□□□□ -1.53
VPS50Q96JG6 AC002553.2-201ENST00000453217 340 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 Z95152.1-201ENST00000453556 656 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 AC093166.2-201ENST00000455969 1017 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 SNORD11.1-201ENST00000459482 85 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 RPL5P22-201ENST00000480199 884 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 MTND4LP2-201ENST00000502312 285 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS50Q96JG6 AC074255.1-201ENST00000511259 501 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 RPL7L1P4-201ENST00000513004 707 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 RN7SKP141-201ENST00000516167 338 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 MIR2117-201ENST00000516780 80 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS50Q96JG6 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS50Q96JG6 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS50Q96JG6 MIR3936-201ENST00000584304 110 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 AC004223.2-201ENST00000590309 544 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS50Q96JG6 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS50Q96JG6 AL139407.1-201ENST00000613826 1175 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 MIR6133-201ENST00000617057 108 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 AL035461.2-201ENST00000619201 524 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS50Q96JG6 AC022079.1-201ENST00000621546 602 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS50Q96JG6 AC104985.3-201ENST00000623479 597 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS50Q96JG6 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS50Q96JG6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS50Q96JG6 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS50Q96JG6 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS50Q96JG6 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS50Q96JG6 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS50Q96JG6 AL355578.1-201ENST00000607405 1328 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 AC104964.3-201ENST00000606115 2860 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 THAP12P5-201ENST00000405864 2275 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 AL132640.2-201ENST00000559968 1698 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS50Q96JG6 U6.112-201ENST00000384129 70 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 RNU6-906P-201ENST00000384700 70 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 RNA5SP91-201ENST00000390902 119 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS50Q96JG6 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS50Q96JG6 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 USP9YP21-201ENST00000420603 432 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS50Q96JG6 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS50Q96JG6 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 Z77249.1-201ENST00000444622 1175 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 RPS23P9-201ENST00000448848 438 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 AC096992.1-201ENST00000459808 709 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 RPS4XP6-201ENST00000477670 797 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 AC006539.1-201ENST00000481419 501 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 AC147055.3-201ENST00000510547 851 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 GAPDHP62-201ENST00000515313 990 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 RNU6-311P-201ENST00000516224 102 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 AP001636.2-201ENST00000525517 696 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 AL049830.4-201ENST00000555149 351 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 SETP1-201ENST00000556014 845 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 GAS5-AS1-201ENST00000602767 694 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 AL135786.2-201ENST00000608422 615 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 RN7SL787P-201ENST00000613000 284 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 RN7SL544P-201ENST00000617232 284 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 MIR6729-201ENST00000618194 65 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 Z99129.2-201ENST00000619967 314 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 RN7SL763P-201ENST00000620922 284 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 MTND2P41-201ENST00000637599 773 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms